Pre_GI: BLASTN Hits

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Query: NC_008269:1067082 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 1067082, End: 1090099, Length: 23018

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008278:5012000*5012000505245140452Frankia alni ACN14a, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015514:19234281923428194601322586Cellulomonas fimi ATCC 484 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014151:856354*85635488191525562Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014151:36119563611956366328251327Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg