Query: NC_008268:361424 Rhodococcus sp. RHA1, complete genome
Start: 361424, End: 383128, Length: 21705
Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_019673:895418 | 895418 | 916384 | 20967 | Saccharothrix espanaensis DSM 44229 complete genome | 7e-50 | 206 | BLASTN svg | BLASTP svg |
| NC_018750:6869675 | 6869675 | 6893689 | 24015 | Streptomyces venezuelae ATCC 10712, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
| NC_020302:85821 | 85821 | 140742 | 54922 | Corynebacterium halotolerans YIM 70093 = DSM 44683, complete | 5e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_014151:3611956 | 3611956 | 3663282 | 51327 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
| NC_014151:856354* | 856354 | 881915 | 25562 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_008269:577111* | 577111 | 595318 | 18208 | Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_014158:2561441* | 2561441 | 2585255 | 23815 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_014158:233733 | 233733 | 327711 | 93979 | Tsukamurella paurometabola DSM 20162 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_004369:1268956 | 1268956 | 1310049 | 41094 | Corynebacterium efficiens YS-314, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_004369:256262 | 256262 | 289471 | 33210 | Corynebacterium efficiens YS-314, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_004369:531579* | 531579 | 562099 | 30521 | Corynebacterium efficiens YS-314, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_021177:2139838 | 2139838 | 2164842 | 25005 | Streptomyces fulvissimus DSM 40593, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_018524:4988810* | 4988810 | 5037464 | 48655 | Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_010612:5301135 | 5301135 | 5327018 | 25884 | Mycobacterium marinum M, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_008726:3968222 | 3968222 | 3998758 | 30537 | Mycobacterium vanbaalenii PYR-1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008726:610000 | 610000 | 628820 | 18821 | Mycobacterium vanbaalenii PYR-1, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015675:4526500 | 4526500 | 4553840 | 27341 | Mesorhizobium opportunistum WSM2075 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_015588:1847500 | 1847500 | 1878183 | 30684 | Isoptericola variabilis 225 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014814:4235477 | 4235477 | 4286921 | 51445 | Mycobacterium sp. Spyr1 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008313:3456741 | 3456741 | 3483415 | 26675 | Ralstonia eutropha H16 chromosome 1, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009921:5400663 | 5400663 | 5419811 | 19149 | Frankia sp. EAN1pec, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |