Pre_GI: BLASTN Hits

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Query: NC_008148:672608 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 672608, End: 692414, Length: 19807

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015656:27957842795784281882923046Frankia symbiont of Datisca glomerata chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_019673:526000*52600056212836129Saccharothrix espanaensis DSM 44229 complete genome6e-1073.8BLASTN svgBLASTP svg
NC_021177:4258102*4258102427958121480Streptomyces fulvissimus DSM 40593, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006138:22583222583226772241891Desulfotalea psychrophila LSv54, complete genome9e-0660BLASTN svgBLASTP svg