Pre_GI: BLASTN Hits

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Query: NC_008148:2231045 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 2231045, End: 2285149, Length: 54105

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome0739BLASTN svgBLASTP svg
NC_008148:18598881859888192073060843Rubrobacter xylanophilus DSM 9941, complete genome8e-166593BLASTN svgBLASTP svg
NC_013446:2237854*2237854227259934746Comamonas testosteroni CNB-2, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_015514:3351052*3351052338153030479Cellulomonas fimi ATCC 484 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_014659:10065001006500103066624167Rhodococcus equi 103S, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_013854:33054333054335359923057Azospirillum sp. B510, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_013757:72998672998676859938614Geodermatophilus obscurus DSM 43160, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_008789:13935261393526142028526760Halorhodospira halophila SL1, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_008340:17337351733735176122027486Alkalilimnicola ehrlichei MLHE-1, complete genome6e-0661.9BLASTN svgBLASTP svg