Query: NC_008148:1711679 Rubrobacter xylanophilus DSM 9941, complete genome
Start: 1711679, End: 1731962, Length: 20284
Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria
General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_008702:3375027 | 3375027 | 3398831 | 23805 | Azoarcus sp. BH72, complete genome | 6e-81 | 309 | BLASTN svg | BLASTP svg |
NC_008313:2142397 | 2142397 | 2166337 | 23941 | Ralstonia eutropha H16 chromosome 1, complete sequence | 6e-75 | 289 | BLASTN svg | BLASTP svg |
NC_007958:396439* | 396439 | 421437 | 24999 | Rhodopseudomonas palustris BisB5, complete genome | 3e-55 | 224 | BLASTN svg | BLASTP svg |
NC_005296:2860000* | 2860000 | 2884922 | 24923 | Rhodopseudomonas palustris CGA009, complete genome | 3e-49 | 204 | BLASTN svg | BLASTP svg |
NC_002678:4859111 | 4859111 | 4883496 | 24386 | Mesorhizobium loti MAFF303099, complete genome | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_007802:1093785 | 1093785 | 1116342 | 22558 | Jannaschia sp. CCS1, complete genome | 5e-26 | 127 | BLASTN svg | BLASTP svg |
NC_008700:1627401* | 1627401 | 1656122 | 28722 | Shewanella amazonensis SB2B, complete genome | 8e-25 | 123 | BLASTN svg | BLASTP svg |
NC_014924:2517068 | 2517068 | 2540128 | 23061 | Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_011992:1968258 | 1968258 | 1998510 | 30253 | Acidovorax ebreus TPSY, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007626:697926 | 697926 | 725420 | 27495 | Magnetospirillum magneticum AMB-1, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_020126:5152359* | 5152359 | 5173959 | 21601 | Myxococcus stipitatus DSM 14675, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_010397:2063561 | 2063561 | 2087015 | 23455 | Mycobacterium abscessus chromosome Chromosome, complete sequence | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_019673:2635585* | 2635585 | 2659537 | 23953 | Saccharothrix espanaensis DSM 44229 complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_008786:266959 | 266959 | 291883 | 24925 | Verminephrobacter eiseniae EF01-2, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013204:2955500 | 2955500 | 2980122 | 24623 | Eggerthella lenta DSM 2243, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_014323:992978 | 992978 | 1034361 | 41384 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015666:1849618* | 1849618 | 1878324 | 28707 | Halopiger xanaduensis SH-6 chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015594:410454 | 410454 | 451099 | 40646 | Sphingobium chlorophenolicum L-1 chromosome chromosome 2, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008701:195850 | 195850 | 258002 | 62153 | Pyrobaculum islandicum DSM 4184, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008789:7347* | 7347 | 30540 | 23194 | Halorhodospira halophila SL1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018868:3036205* | 3036205 | 3075475 | 39271 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007963:2555012* | 2555012 | 2575739 | 20728 | Chromohalobacter salexigens DSM 3043, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_008786:2729635 | 2729635 | 2771343 | 41709 | Verminephrobacter eiseniae EF01-2, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_009512:3282500 | 3282500 | 3315887 | 33388 | Pseudomonas putida F1, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_009921:4399000 | 4399000 | 4424599 | 25600 | Frankia sp. EAN1pec, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_010612:3745332* | 3745332 | 3781318 | 35987 | Mycobacterium marinum M, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_011886:177039 | 177039 | 201205 | 24167 | Arthrobacter chlorophenolicus A6, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_012590:637651 | 637651 | 666039 | 28389 | Corynebacterium aurimucosum ATCC 700975, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_012792:1091669 | 1091669 | 1115099 | 23431 | Variovorax paradoxus S110 chromosome 2, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014323:27327 | 27327 | 46470 | 19144 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_005085:24623 | 24623 | 49127 | 24505 | Chromobacterium violaceum ATCC 12472, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |