Pre_GI: BLASTN Hits

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Query: NC_008148:1567703 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 1567703, End: 1592103, Length: 24401

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome03608BLASTN svgBLASTP svg
NC_008148:79261079261081163719028Rubrobacter xylanophilus DSM 9941, complete genome02571BLASTN svgBLASTP svg
NC_010338:41486674148667417175123085Caulobacter sp. K31, complete genome8e-19103BLASTN svgBLASTP svg
NC_019673:80579418057941808196224022Saccharothrix espanaensis DSM 44229 complete genome5e-1797.6BLASTN svgBLASTP svg
NC_000117:845141*84514189495049810Chlamydia trachomatis D/UW-3/CX, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007511:35121003512100353789225793Burkholderia sp. 383 chromosome 2, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_013947:5431741*5431741545589424154Stackebrandtia nassauensis DSM 44728 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008061:23685172368517239913930623Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_009664:1569335*1569335161469045356Kineococcus radiotolerans SRS30216, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007517:11074081107408112620918802Geobacter metallireducens GS-15, complete genome3e-0661.9BLASTN svgBLASTP svg