Pre_GI: BLASTN Hits

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Query: NC_008146:1016446 Mycobacterium sp. MCS, complete genome

Start: 1016446, End: 1044593, Length: 28148

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome020850BLASTN svgBLASTP svg
NC_009077:1027357*1027357106455537199Mycobacterium sp. JLS, complete genome06120BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome02950BLASTN svgBLASTP svg
NC_014814:38920003892000392242630427Mycobacterium sp. Spyr1 chromosome, complete genome02704BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome02672BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome02670BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome02670BLASTN svgBLASTP svg
NC_008595:18692841869284189175722474Mycobacterium avium 104, complete genome01354BLASTN svgBLASTP svg
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome01354BLASTN svgBLASTP svg
NC_008595:51689415168941521359944659Mycobacterium avium 104, complete genome01346BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome01322BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome0698BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome0698BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome5e-178632BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome2e-174620BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome2e-174620BLASTN svgBLASTP svg
NC_008595:19114911911491193399222502Mycobacterium avium 104, complete genome7e-174618BLASTN svgBLASTP svg
NC_008595:26872452687245272814940905Mycobacterium avium 104, complete genome3e-173617BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome3e-173617BLASTN svgBLASTP svg
NC_008595:52344675234467525314218676Mycobacterium avium 104, complete genome4e-160573BLASTN svgBLASTP svg
NC_008595:66150766150768418722681Mycobacterium avium 104, complete genome2e-152547BLASTN svgBLASTP svg
NC_019673:8763773*8763773879367729905Saccharothrix espanaensis DSM 44229 complete genome6e-125456BLASTN svgBLASTP svg
NC_015957:639774*63977466650226729Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-95359BLASTN svgBLASTP svg
NC_008596:2873675*2873675289516021486Mycobacterium smegmatis str. MC2 155, complete genome1e-92349BLASTN svgBLASTP svg
NC_003888:5042283*5042283508756145279Streptomyces coelicolor A3(2), complete genome6e-91343BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome4e-89337BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome4e-89337BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome4e-89337BLASTN svgBLASTP svg
NC_010572:3363830*3363830342121457385Streptomyces griseus subsp. griseus NBRC 13350, complete genome8e-75289BLASTN svgBLASTP svg
NC_003155:5957657*5957657598116223506Streptomyces avermitilis MA-4680, complete genome3e-74287BLASTN svgBLASTP svg
NC_021177:4912982*4912982493562522644Streptomyces fulvissimus DSM 40593, complete genome2e-72281BLASTN svgBLASTP svg
NC_018750:4688968*4688968471073821771Streptomyces venezuelae ATCC 10712, complete genome8e-72280BLASTN svgBLASTP svg
NC_014814:43265004326500435109924600Mycobacterium sp. Spyr1 chromosome, complete genome8e-72280BLASTN svgBLASTP svg
NC_009664:1569335*1569335161469045356Kineococcus radiotolerans SRS30216, complete genome3e-68268BLASTN svgBLASTP svg
NC_014215:14250014250016776025261Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,5e-42180BLASTN svgBLASTP svg
NC_014215:22592902259290228320523916Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,5e-42180BLASTN svgBLASTP svg
NC_008596:51860425186042520471918678Mycobacterium smegmatis str. MC2 155, complete genome2e-32149BLASTN svgBLASTP svg
NC_013169:612456*61245664773335278Kytococcus sedentarius DSM 20547, complete genome1e-30143BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome2e-29139BLASTN svgBLASTP svg
NC_011891:2607812*2607812263605028239Anaeromyxobacter dehalogenans 2CP-1, complete genome3e-28135BLASTN svgBLASTP svg
NC_011145:2543321*2543321257209928779Anaeromyxobacter sp. K, complete genome3e-28135BLASTN svgBLASTP svg
NC_007760:1806136*1806136183371527580Anaeromyxobacter dehalogenans 2CP-C, complete genome3e-28135BLASTN svgBLASTP svg
NC_002944:42540114254011427748823478Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-25125BLASTN svgBLASTP svg
NC_008596:60095116009511605382644316Mycobacterium smegmatis str. MC2 155, complete genome4e-24121BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome3e-22115BLASTN svgBLASTP svg
NC_008789:942309*94230996834126033Halorhodospira halophila SL1, complete genome4e-21111BLASTN svgBLASTP svg
NC_008340:480399*48039950429523897Alkalilimnicola ehrlichei MLHE-1, complete genome2e-20109BLASTN svgBLASTP svg
NC_009921:4035225*4035225407387638652Frankia sp. EAN1pec, complete genome4e-18101BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_012560:582011*58201160222120211Azotobacter vinelandii DJ, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_021150:582011*58201160222120211Azotobacter vinelandii CA6, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013235:49387984938798496312324326Nakamurella multipartita DSM 44233, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015125:24439452443945246359819654Microbacterium testaceum StLB037, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012522:59876445987644601286925226Rhodococcus opacus B4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_000962:16840051684005170853924535Mycobacterium tuberculosis H37Rv, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_002755:16841611684161170880524645Mycobacterium tuberculosis CDC1551, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009525:16855221685522171115225631Mycobacterium tuberculosis H37Ra, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009565:16886421688642171216323522Mycobacterium tuberculosis F11, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_020126:4430142*4430142445344823307Myxococcus stipitatus DSM 14675, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014159:37920379205903321114Tsukamurella paurometabola DSM 20162 plasmid pTpau01, complete2e-1385.7BLASTN svgBLASTP svg
NC_014158:23373323373332771193979Tsukamurella paurometabola DSM 20162 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002516:4747154*4747154479172444571Pseudomonas aeruginosa PAO1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010162:573709*57370959609922391Sorangium cellulosum 'So ce 56', complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011295:847903*84790386884620944Coprothermobacter proteolyticus DSM 5265, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011898:649000*64900067139722398Clostridium cellulolyticum H10, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014209:1392115*1392115141109918985Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,1e-1179.8BLASTN svgBLASTP svg
NC_015848:17081761708176173271724542Mycobacterium canettii CIPT 140010059, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_019950:16899101689910171687926970Mycobacterium canettii CIPT 140060008 complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015711:5479879*5479879550459924721Myxococcus fulvus HW-1 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010003:335348*33534835377918432Petrotoga mobilis SJ95, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_012846:825341*82534184359918259Bartonella grahamii as4aup, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015957:3067919*3067919309418126263Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015259:1803266*1803266182644223177Polymorphum gilvum SL003B-26A1 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014932:985882*985882103391148030Bartonella clarridgeiae 73, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009828:469778*46977851143441657Thermotoga lettingae TMO, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_008726:17761921776192180185525664Mycobacterium vanbaalenii PYR-1, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_006348:2738425*2738425276209923675Burkholderia mallei ATCC 23344 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_010002:528529*52852955003421506Delftia acidovorans SPH-1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_018531:36258103625810365959233783Arthrobacter sp. Rue61a chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015635:51547305154730520644351714Microlunatus phosphovorus NM-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007645:6350079*6350079637233822260Hahella chejuensis KCTC 2396, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_000963:141500*14150016904927550Rickettsia prowazekii str. Madrid E, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007109:1206421*1206421123611629696Rickettsia felis URRWXCal2, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007940:1235250*1235250125869223443Rickettsia bellii RML369-C, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009883:277409*27740930010322695Rickettsia bellii OSU 85-389, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014657:1775929*1775929179657020642Caldicellulosiruptor owensensis OL chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_020301:669000*66900071117642177Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002927:5327094*5327094535399926906Bordetella bronchiseptica RB50, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005955:841781*84178186085019070Bartonella quintana str. Toulouse, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008268:5781604*5781604581424432641Rhodococcus sp. RHA1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013235:13259751325975134970523731Nakamurella multipartita DSM 44233, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014318:61086336108633613113322501Amycolatopsis mediterranei U32 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015707:826649*82664984822321575Thermotoga thermarum DSM 5069 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020299:764526*76452681749952974Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete2e-0765.9BLASTN svgBLASTP svg
NC_020300:646500*64650066871022211Bartonella australis Aust/NH1, complete genome2e-0765.9BLASTN svgBLASTP svg
CU928160:4248621*4248621427441825798Escherichia coli IAI1 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_000913:4159090*4159090417760618517Escherichia coli K12, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006177:2943259*2943259296594222684Symbiobacterium thermophilum IAM 14863, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010473:4256000*4256000427821222213Escherichia coli str. K-12 substr. DH10B, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011750:4543135*4543135456499721863Escherichia coli IAI39 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014538:1075720*1075720110327327554Thermoanaerobacter sp. X513 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014964:923681*92368196813644456Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete8e-0763.9BLASTN svgBLASTP svg
NC_015458:3077804*3077804310090323100Pusillimonas sp. T7-7 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_016024:275845*27584529878822944Candidatus Chloracidobacterium thermophilum B chromosome chromosome8e-0763.9BLASTN svgBLASTP svg
NC_007484:2665195*2665195268309917905Nitrosococcus oceani ATCC 19707, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010125:3506955*3506955353159924645Gluconacetobacter diazotrophicus PAl 5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010730:280784*28078431468733904Sulfurihydrogenibium sp. YO3AOP1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013960:2440453*2440453245844817996Nitrosococcus halophilus Nc4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014315:2346927*2346927237964732721Nitrosococcus watsoni C-113 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015312:1220500*1220500124609925600Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006142:140853*14085318445043598Rickettsia typhi str. Wilmington, complete genome3e-0661.9BLASTN svgBLASTP svg