Pre_GI: BLASTN Hits

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Query: NC_007951:1768236 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1768236, End: 1796664, Length: 28429

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015376:14317281431728145164119914Burkholderia gladioli BSR3 chromosome chromosome 2, complete5e-36161BLASTN svgBLASTP svg
NC_007434:13225001322500135459932100Burkholderia pseudomallei 1710b chromosome I, complete sequence3e-34155BLASTN svgBLASTP svg
NC_009076:11025001102500112459922100Burkholderia pseudomallei 1106a chromosome I, complete sequence7e-32147BLASTN svgBLASTP svg
NC_009074:10920001092000111222420225Burkholderia pseudomallei 668 chromosome I, complete sequence7e-32147BLASTN svgBLASTP svg
NC_007651:3064530*30645303173670109141Burkholderia thailandensis E264 chromosome I, complete sequence3e-31145BLASTN svgBLASTP svg
NC_007435:191821*19182122269530875Burkholderia pseudomallei 1710b chromosome II, complete sequence3e-31145BLASTN svgBLASTP svg
NC_003295:92125692125694709925844Ralstonia solanacearum GMI1000, complete genome7e-26127BLASTN svgBLASTP svg
NC_012721:22236412223641224859924959Burkholderia glumae BGR1 chromosome 2, complete genome4e-24121BLASTN svgBLASTP svg
NC_003296:67379067379072609952310Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete4e-24121BLASTN svgBLASTP svg
NC_008391:63999663999666160321608Burkholderia cepacia AMMD chromosome 2, complete sequence7e-23117BLASTN svgBLASTP svg
NC_010551:41548741548744051025024Burkholderia ambifaria MC40-6 chromosome 1, complete sequence4e-21111BLASTN svgBLASTP svg
NC_015377:868478684711271425868Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_009076:37654413765441380167036230Burkholderia pseudomallei 1106a chromosome I, complete sequence6e-1797.6BLASTN svgBLASTP svg
NC_007435:14469161446916149170044785Burkholderia pseudomallei 1710b chromosome II, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_009078:27187412718741276343044690Burkholderia pseudomallei 1106a chromosome II, complete sequence9e-1383.8BLASTN svgBLASTP svg
NC_006351:27597082759708280620746500Burkholderia pseudomallei K96243 chromosome 2, complete sequence6e-1177.8BLASTN svgBLASTP svg
NC_015376:36313923631392365107419683Burkholderia gladioli BSR3 chromosome chromosome 2, complete9e-1073.8BLASTN svgBLASTP svg
NC_010682:112474724747Ralstonia pickettii 12J chromosome 1, complete sequence5e-0867.9BLASTN svgBLASTP svg