Pre_GI: BLASTN Hits

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Query: NC_007948:517893 Polaromonas sp. JS666, complete genome

Start: 517893, End: 539277, Length: 21385

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007948:16955001695500171430618807Polaromonas sp. JS666, complete genome5e-103383BLASTN svgBLASTP svg
NC_007948:360199*36019939230232104Polaromonas sp. JS666, complete genome2e-78301BLASTN svgBLASTP svg
NC_015422:45080284508028454712739100Alicycliphilus denitrificans K601 chromosome, complete genome1e-63252BLASTN svgBLASTP svg
NC_009138:66800066800069732929330Herminiimonas arsenicoxydans, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008570:2216736*2216736227194055205Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015376:11850001185000120456219563Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-0661.9BLASTN svgBLASTP svg