Query: NC_007948:1574881 Polaromonas sp. JS666, complete genome
Start: 1574881, End: 1608339, Length: 33459
Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012791:2386000 | 2386000 | 2408977 | 22978 | Variovorax paradoxus S110 chromosome 1, complete genome | 3e-142 | 513 | BLASTN svg | BLASTP svg |
NC_008781:3365468* | 3365468 | 3401272 | 35805 | Polaromonas naphthalenivorans CJ2, complete genome | 1e-141 | 511 | BLASTN svg | BLASTP svg |
NC_012791:4079062 | 4079062 | 4102530 | 23469 | Variovorax paradoxus S110 chromosome 1, complete genome | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_012791:4007780* | 4007780 | 4030673 | 22894 | Variovorax paradoxus S110 chromosome 1, complete genome | 1e-18 | 103 | BLASTN svg | BLASTP svg |
NC_015733:2720183 | 2720183 | 2760599 | 40417 | Pseudomonas putida S16 chromosome, complete genome | 5e-18 | 101 | BLASTN svg | BLASTP svg |
NC_007948:1972290* | 1972290 | 2018915 | 46626 | Polaromonas sp. JS666, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
NC_015563:2018038 | 2018038 | 2037721 | 19684 | Delftia sp. Cs1-4 chromosome, complete genome | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015422:3581848* | 3581848 | 3605959 | 24112 | Alicycliphilus denitrificans K601 chromosome, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_012483:3731542 | 3731542 | 3807085 | 75544 | Acidobacterium capsulatum ATCC 51196, complete genome | 7e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_003296:556836 | 556836 | 611819 | 54984 | Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015563:3979500* | 3979500 | 4002736 | 23237 | Delftia sp. Cs1-4 chromosome, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007908:1108494 | 1108494 | 1161899 | 53406 | Rhodoferax ferrireducens T118, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |