Query: NC_007778:3974344 Rhodopseudomonas palustris HaA2, complete genome
Start: 3974344, End: 3995576, Length: 21233
Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_014217:716500 | 716500 | 737763 | 21264 | Starkeya novella DSM 506 chromosome, complete genome | 2e-41 | 178 | BLASTN svg | BLASTP svg |
| NC_014375:1242750 | 1242750 | 1273332 | 30583 | Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome | 9e-37 | 163 | BLASTN svg | BLASTP svg |
| NC_008687:45967 | 45967 | 68199 | 22233 | Paracoccus denitrificans PD1222 chromosome 2, complete sequence | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_014034:1816000 | 1816000 | 1842048 | 26049 | Rhodobacter capsulatus SB1003 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_014931:6203872 | 6203872 | 6250517 | 46646 | Variovorax paradoxus EPS chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_011894:5787990 | 5787990 | 5833599 | 45610 | Methylobacterium nodulans ORS 2060, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_014664:1360524* | 1360524 | 1378871 | 18348 | Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010086:810890 | 810890 | 835731 | 24842 | Burkholderia multivorans ATCC 17616 chromosome 2, complete | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_005296:2860000* | 2860000 | 2884922 | 24923 | Rhodopseudomonas palustris CGA009, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015593:203000* | 203000 | 235196 | 32197 | Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_014837:3633378* | 3633378 | 3663483 | 30106 | Pantoea sp. At-9b chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_014831:8965* | 8965 | 43706 | 34742 | Thermaerobacter marianensis DSM 12885 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014006:1204500 | 1204500 | 1223667 | 19168 | Sphingobium japonicum UT26S chromosome 1, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_011770:3735162* | 3735162 | 3763836 | 28675 | Pseudomonas aeruginosa LESB58, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |