Pre_GI: BLASTN Hits

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Query: NC_007778:3974344 Rhodopseudomonas palustris HaA2, complete genome

Start: 3974344, End: 3995576, Length: 21233

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014217:71650071650073776321264Starkeya novella DSM 506 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_014375:12427501242750127333230583Brevundimonas subvibrioides ATCC 15264 chromosome, complete genome9e-37163BLASTN svgBLASTP svg
NC_008687:45967459676819922233Paracoccus denitrificans PD1222 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_014034:18160001816000184204826049Rhodobacter capsulatus SB1003 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014931:62038726203872625051746646Variovorax paradoxus EPS chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011894:57879905787990583359945610Methylobacterium nodulans ORS 2060, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014664:1360524*1360524137887118348Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010086:81089081089083573124842Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-0971.9BLASTN svgBLASTP svg
NC_005296:2860000*2860000288492224923Rhodopseudomonas palustris CGA009, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015593:203000*20300023519632197Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete4e-0867.9BLASTN svgBLASTP svg
NC_014837:3633378*3633378366348330106Pantoea sp. At-9b chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014831:8965*89654370634742Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014006:12045001204500122366719168Sphingobium japonicum UT26S chromosome 1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome2e-0661.9BLASTN svgBLASTP svg