Pre_GI: BLASTN Hits

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Query: NC_007333:1677406 Thermobifida fusca YX, complete genome

Start: 1677406, End: 1699677, Length: 22272

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014210:54093245409324543142122098Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,6e-149535BLASTN svgBLASTP svg
NC_014165:25330402533040256380530766Thermobispora bispora DSM 43833 chromosome, complete genome3e-77297BLASTN svgBLASTP svg
NC_007333:174389017438901873648129759Thermobifida fusca YX, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018524:45998094599809463651236704Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_018524:301992*30199232409922108Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_018524:45644934564493458409919607Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015576:40701954070195409284122647Mycobacterium sp. JDM601 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018524:2246225*2246225228118534961Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg