Pre_GI: BLASTN Hits

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Query: NC_006814:1538175 Lactobacillus acidophilus NCFM, complete genome

Start: 1538175, End: 1562567, Length: 24393

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.




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Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015697:1295412*1295412131859923188Lactobacillus reuteri SD2112 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009513:169146*16914619195222807Lactobacillus reuteri F275, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014393:4541000*4541000456644025441Clostridium cellulovorans 743B chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009613:32993832993835397824041Flavobacterium psychrophilum JIP02/86, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004461:74628474628477013223849Staphylococcus epidermidis ATCC 12228, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002976:63879963879966264823850Staphylococcus epidermidis RP62A, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014150:23999972399997242070520709Brachyspira murdochii DSM 12563 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014727:1485656*1485656150613920484Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,5e-0867.9BLASTN svgBLASTP svg
NC_008593:1797000*1797000182201325014Clostridium novyi NT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008593:153014*15301417175318740Clostridium novyi NT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008530:469802*46980249214622345Lactobacillus gasseri ATCC 33323, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008530:1775841*1775841179784122001Lactobacillus gasseri ATCC 33323, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008530:1551356*1551356158801736662Lactobacillus gasseri ATCC 33323, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008497:79144*791449709917956Lactobacillus brevis ATCC 367, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008497:556365*55636557476918405Lactobacillus brevis ATCC 367, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008497:447427*44742746717819752Lactobacillus brevis ATCC 367, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008497:1498430*1498430151761719188Lactobacillus brevis ATCC 367, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008497:1111891*1111891114836436474Lactobacillus brevis ATCC 367, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007929:67810*678109245724648Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007929:428743*42874345327324531Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008593:1917118*1917118196528648169Clostridium novyi NT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008593:2020473*2020473204359923127Clostridium novyi NT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:3395187*3395187343021835032Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:173280*17328022135248073Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:1*11759917599Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010674:426256*42625645229426039Clostridium botulinum B str. Eklund 17B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010674:3674739*3674739372221147473Clostridium botulinum B str. Eklund 17B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010674:3581044*3581044360559924556Clostridium botulinum B str. Eklund 17B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010674:192951*19295121941726467Clostridium botulinum B str. Eklund 17B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010674:1*12076220762Clostridium botulinum B str. Eklund 17B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010080:69000*690009485925860Lactobacillus helveticus DPC 4571, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010080:445398*44539846977024373Lactobacillus helveticus DPC 4571, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010080:1685280*1685280170653121252Lactobacillus helveticus DPC 4571, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008593:2527064*2527064255549928436Clostridium novyi NT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008593:2457594*2457594250471047117Clostridium novyi NT, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007929:210088*21008823862428537Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007929:1805000*1805000183399929000Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:2762464*2762464278659224129Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:241352*24135226701725666Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:1010610*1010610103713326524Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:558500*55850058274124242Clostridium tetani E88, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:32094*320945657224479Clostridium tetani E88, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:2777291*2777291280449927209Clostridium tetani E88, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:162670*16267018073018061Clostridium tetani E88, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004557:1*11139711397Clostridium tetani E88, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003030:303812*30381236254758736Clostridium acetobutylicum ATCC 824, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003030:249648*24964827192622279Clostridium acetobutylicum ATCC 824, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003030:155554*15555417321517662Clostridium acetobutylicum ATCC 824, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003030:1097625*1097625112310625482Clostridium acetobutylicum ATCC 824, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004668:3156247*3156247318179425548Enterococcus faecalis V583, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005362:1651767*1651767169076238996Lactobacillus johnsonii NCC 533, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005362:1870620*1870620189402323404Lactobacillus johnsonii NCC 533, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007929:1397989*1397989142649328505Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007929:1290568*1290568131407323506Lactobacillus salivarius subsp. salivarius UCC118, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007576:471500*47150049611124612Lactobacillus sakei subsp. sakei 23K, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007576:435713*43571345815822446Lactobacillus sakei subsp. sakei 23K, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007576:299266*29926632482425559Lactobacillus sakei subsp. sakei 23K, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007576:1854136*1854136187957225437Lactobacillus sakei subsp. sakei 23K, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007576:1747662*1747662177048822827Lactobacillus sakei subsp. sakei 23K, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007576:1564739*1564739158846023722Lactobacillus sakei subsp. sakei 23K, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006814:51500*515007926227763Lactobacillus acidophilus NCFM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006814:403723*40372344563241910Lactobacillus acidophilus NCFM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006814:1618588*1618588164662328036Lactobacillus acidophilus NCFM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005362:550823*55082357585325031Lactobacillus johnsonii NCC 533, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003030:1*11859918599Clostridium acetobutylicum ATCC 824, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018528:1681060*1681060170729126232Lactobacillus helveticus R0052 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015975:752927*75292777561922693Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015975:441580*44158046671625137Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015975:380500*38050040582525326Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015975:267994*26799428810120108Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015975:1936504*1936504196101924516Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015975:1493636*1493636151659922964Lactobacillus ruminis ATCC 27782 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015703:234960*23496025450919550Runella slithyformis DSM 19594 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015687:303810*30381036254358734Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015687:250768*25076827192421157Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015687:155554*15555417321417661Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015687:1097447*1097447112292725481Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018528:446610*44661047359926990Lactobacillus helveticus R0052 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018528:65000*650009177626777Lactobacillus helveticus R0052 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:1*12890828908Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:3409199*3409199343177822580Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:162236*16223618461322378Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:111460614606Clostridium pasteurianum BC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:64267046426704645309926396Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:6216000*6216000625247336474Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:57789995778999580315424156Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:57520995752099577709925001Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:42465004246500427194125442Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:117983*11798315068032698Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:795500*79550085457259073Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020291:552104*55210457702024917Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015687:1*11859918599Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015602:1810500*1810500183260222103Lactobacillus kefiranofaciens ZW3 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014724:59000*590008067321674Lactobacillus amylovorus GRL 1112 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014724:439594*43959448564446051Lactobacillus amylovorus GRL 1112 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014724:1731238*1731238175280921572Lactobacillus amylovorus GRL 1112 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014393:92500*9250013027937780Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014393:3425694*3425694347141745724Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014393:187454*18745423159944146Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014393:139690*13969016309923410Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014393:1*11925119251Clostridium cellulovorans 743B chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014106:54587*545877853323947Lactobacillus crispatus ST1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014106:419511*41951145680837298Lactobacillus crispatus ST1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014106:1658103*1658103168286224760Lactobacillus crispatus ST1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:420025*42002544661626592Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010723:3530000*3530000357960049601Clostridium botulinum E3 str. Alaska E43, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014727:1537183*1537183156048823306Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_014727:1736500*1736500175580519306Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_015602:1339067*1339067136576626700Lactobacillus kefiranofaciens ZW3 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015602:117939*11793915324635308Lactobacillus kefiranofaciens ZW3 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015428:823420*82342084476521346Lactobacillus buchneri NRRL B-30929 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015428:700479*70047972176721289Lactobacillus buchneri NRRL B-30929 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015428:2291430*2291430231538823959Lactobacillus buchneri NRRL B-30929 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015428:1668465*1668465168767919215Lactobacillus buchneri NRRL B-30929 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015428:1544728*1544728159936054633Lactobacillus buchneri NRRL B-30929 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015391:24884502488450250774219293Carnobacterium sp. 17-4 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015214:48999*489997018721189Lactobacillus acidophilus 30SC chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015214:437733*43773348259944867Lactobacillus acidophilus 30SC chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015214:1700000*1700000172159921600Lactobacillus acidophilus 30SC chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014727:853500*85350087209918600Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_014727:2010000*2010000203212022121Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_012925:29353293534972520373Streptococcus suis P1/7, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015732:27109132710913272914718235Spirochaeta caldaria DSM 7334 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006449:1572000*1572000159415422155Streptococcus thermophilus CNRZ1066, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006448:1568000*1568000159009922100Streptococcus thermophilus LMG 18311, complete genome3e-0661.9BLASTN svgBLASTP svg