Pre_GI: BLASTN Hits

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Query: NC_006663:1 Staphylococcus epidermidis RP62A plasmid pSERP, complete sequence

Start: 1, End: 27999, Length: 27999

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a strongly adherent, slime-producing, pathogenic strain isolated from a patient with intravascular catheter-associated sepsis. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. S. epidermidis has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Staphylococcus epidermidis is highly resistant to many antibiotics including penicillins and cephalosporins.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013893:17239391723939174613522197Staphylococcus lugdunensis HKU09-01 chromosome, complete genome02244BLASTN svgBLASTP svg
NC_011898:3367457*3367457341359946143Clostridium cellulolyticum H10, complete genome01895BLASTN svgBLASTP svg
NC_004461:73390733909894225553Staphylococcus epidermidis ATCC 12228, complete genome01518BLASTN svgBLASTP svg
NC_002976:2580485*2580485260359923115Staphylococcus epidermidis RP62A, complete genome01511BLASTN svgBLASTP svg
NC_007168:16431*164313433517905Staphylococcus haemolyticus JCSC1435, complete genome01483BLASTN svgBLASTP svg
NC_002745:16000*160003710921110Staphylococcus aureus subsp. aureus N315, complete genome01400BLASTN svgBLASTP svg
NC_009782:16000*160003711021111Staphylococcus aureus subsp. aureus Mu3, complete genome01400BLASTN svgBLASTP svg
NC_007622:13974071397407142300525599Staphylococcus aureus RF122, complete genome01061BLASTN svgBLASTP svg
NC_008346:25232892523289256197838690Syntrophomonas wolfei subsp. wolfei str. Goettingen, complete5e-36161BLASTN svgBLASTP svg
CP002207:13585971358597140857849982Bacillus atrophaeus 1942, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014483:49573154957315498233125017Paenibacillus polymyxa E681 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg