Pre_GI: BLASTN Hits

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Query: NC_006512:2211654 Idiomarina loihiensis L2TR, complete genome

Start: 2211654, End: 2238203, Length: 26550

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004347:79189779189781264920753Shewanella oneidensis MR-1, complete genome2e-32149BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence4e-30141BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome7e-29137BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome1e-27133BLASTN svgBLASTP svg
NC_009901:40281754028175404725419080Shewanella pealeana ATCC 700345, complete genome2e-26129BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome6e-26127BLASTN svgBLASTP svg
NC_015161:2060369*2060369208509924731Deinococcus proteolyticus MRP chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_008345:37569773756977377563418658Shewanella frigidimarina NCIMB 400, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_018868:29355802935580295799622417Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_014931:25114232511423253417122749Variovorax paradoxus EPS chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015434:3581001*3581001361002729027Verrucosispora maris AB-18-032 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014815:56030005603000562327720278Micromonospora sp. L5 chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_013209:2582878*2582878262254039663Acetobacter pasteurianus IFO 3283-01, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010571:2423732*2423732244807724346Opitutus terrae PB90-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005126:42105004210500424678336284Photorhabdus luminescens subsp. laumondii TTO1, complete genome2e-0765.9BLASTN svgBLASTP svg