Query: NC_006512:2211654 Idiomarina loihiensis L2TR, complete genome
Start: 2211654, End: 2238203, Length: 26550
Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_004347:791897 | 791897 | 812649 | 20753 | Shewanella oneidensis MR-1, complete genome | 2e-32 | 149 | BLASTN svg | BLASTP svg |
| NC_008577:4183361 | 4183361 | 4206326 | 22966 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 4e-30 | 141 | BLASTN svg | BLASTP svg |
| NC_008750:807446 | 807446 | 830712 | 23267 | Shewanella sp. W3-18-1, complete genome | 7e-29 | 137 | BLASTN svg | BLASTP svg |
| NC_008322:722612 | 722612 | 740599 | 17988 | Shewanella sp. MR-7, complete genome | 1e-27 | 133 | BLASTN svg | BLASTP svg |
| NC_009901:4028175 | 4028175 | 4047254 | 19080 | Shewanella pealeana ATCC 700345, complete genome | 2e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_008321:3964414 | 3964414 | 3988599 | 24186 | Shewanella sp. MR-4, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_015161:2060369* | 2060369 | 2085099 | 24731 | Deinococcus proteolyticus MRP chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_008345:3756977 | 3756977 | 3775634 | 18658 | Shewanella frigidimarina NCIMB 400, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_018868:2935580 | 2935580 | 2957996 | 22417 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_014931:2511423 | 2511423 | 2534171 | 22749 | Variovorax paradoxus EPS chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_015434:3581001* | 3581001 | 3610027 | 29027 | Verrucosispora maris AB-18-032 chromosome, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_014815:5603000 | 5603000 | 5623277 | 20278 | Micromonospora sp. L5 chromosome, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013209:2582878* | 2582878 | 2622540 | 39663 | Acetobacter pasteurianus IFO 3283-01, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010571:2423732* | 2423732 | 2448077 | 24346 | Opitutus terrae PB90-1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_005126:4210500 | 4210500 | 4246783 | 36284 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |