Pre_GI: BLASTN Hits

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Query: NC_006510:746814 Geobacillus kaustophilus HTA426, complete genome

Start: 746814, End: 766073, Length: 19260

Host Lineage: Geobacillus kaustophilus; Geobacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: Geobacillus kaustophilus strain HTA426 was first isolated from deep sea sediment of the Mariana Trench in the Pacific Ocean and belongs to a closely related group of thermophilic Bacillus spp. Members of this genus were originally classified as Bacillus. Recent rDNA analysis and DNA-DNA hybridization studies using spore-forming thermophilic subsurface isolates provided enough evidence to define the phylogenetically distinct, physiologically and morphologically consistent taxon Geobacillus. Geobacillus species are chemo-organotrophic, obligately thermophilic, motile, spore-forming, aerobic or facultatively anaerobic. This organism was compared with mesophilic Bacillus spp. to identify genome characteristics and specific genes related to thermophilia. Analysis of the amino acid compositions showed clear differences between Geobacillus kaustophilus and the mesophilic bacilli. In addition, the higher G+C content in Geobacillus kaustophilus rRNA also appears correlated to thermophilia. In addition, tRNA modification by the Geobacillus kaustophilus specific tRNA methyltransferases probably aids in the thermoadaptation of this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020210:661236*66123668494423709Geobacillus sp. GHH01, complete genome02545BLASTN svgBLASTP svg
NC_020210:20449442044944207468329740Geobacillus sp. GHH01, complete genome2e-49204BLASTN svgBLASTP svg
NC_019897:3810000*3810000386600956010Thermobacillus composti KWC4 chromosome, complete genome6e-41176BLASTN svgBLASTP svg
NC_020210:19080001908000193254124542Geobacillus sp. GHH01, complete genome2e-37165BLASTN svgBLASTP svg
NC_014915:33207683320768336792347156Geobacillus sp. Y412MC52 chromosome, complete genome2e-31145BLASTN svgBLASTP svg
NC_013411:33147993314799335852243724Geobacillus sp. Y412MC61, complete genome2e-31145BLASTN svgBLASTP svg
NC_012914:46911746911750315934043Paenibacillus sp. JDR-2, complete genome7e-25123BLASTN svgBLASTP svg
NC_006510:33214263321426336479843373Geobacillus kaustophilus HTA426, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome2e-1281.8BLASTN svgBLASTP svg
CP002207:35840003584000360809924100Bacillus atrophaeus 1942, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_019842:484933*48493354277857846Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,6e-0763.9BLASTN svgBLASTP svg
NC_020410:495184*49518454162646443Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete6e-0763.9BLASTN svgBLASTP svg
NC_011744:68800068800071494226943Vibrio splendidus LGP32 chromosome 2, complete genome9e-0660BLASTN svgBLASTP svg