Query: NC_006361:4574536 Nocardia farcinica IFM 10152, complete genome
Start: 4574536, End: 4593450, Length: 18915
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_007333:1743890 | 1743890 | 1873648 | 129759 | Thermobifida fusca YX, complete genome | 7e-22 | 113 | BLASTN svg | BLASTP svg |
| NC_013131:4422000 | 4422000 | 4450033 | 28034 | Catenulispora acidiphila DSM 44928, complete genome | 6e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_014210:1588426 | 1588426 | 1610099 | 21674 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_019673:1988853* | 1988853 | 2044937 | 56085 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_013729:380312* | 380312 | 404217 | 23906 | Kribbella flavida DSM 17836, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_013510:3117837* | 3117837 | 3150923 | 33087 | Thermomonospora curvata DSM 43183, complete genome | 9e-12 | 79.8 | BLASTN svg | BLASTP svg |
| NC_012803:1552122* | 1552122 | 1579960 | 27839 | Micrococcus luteus NCTC 2665, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013757:1888850* | 1888850 | 1931490 | 42641 | Geodermatophilus obscurus DSM 43160, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013947:1296877* | 1296877 | 1316463 | 19587 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_018524:4988810* | 4988810 | 5037464 | 48655 | Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_015434:2527412 | 2527412 | 2554099 | 26688 | Verrucosispora maris AB-18-032 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_004369:1552847 | 1552847 | 1571599 | 18753 | Corynebacterium efficiens YS-314, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_013159:1422370* | 1422370 | 1441599 | 19230 | Saccharomonospora viridis DSM 43017, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |