Query: NC_006361:3047788 Nocardia farcinica IFM 10152, complete genome
Start: 3047788, End: 3071762, Length: 23975
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_006361:2920028 | 2920028 | 2939810 | 19783 | Nocardia farcinica IFM 10152, complete genome | 1e-165 | 591 | BLASTN svg | BLASTP svg |
| NC_019673:6394319 | 6394319 | 6461357 | 67039 | Saccharothrix espanaensis DSM 44229 complete genome | 8e-56 | 226 | BLASTN svg | BLASTP svg |
| NC_014151:856354* | 856354 | 881915 | 25562 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
| NC_014151:3611956 | 3611956 | 3663282 | 51327 | Cellulomonas flavigena DSM 20109 chromosome, complete genome | 9e-28 | 133 | BLASTN svg | BLASTP svg |
| NC_015656:3232809* | 3232809 | 3251973 | 19165 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 9e-25 | 123 | BLASTN svg | BLASTP svg |
| NC_010617:263985 | 263985 | 287231 | 23247 | Kocuria rhizophila DC2201, complete genome | 6e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_009142:2480608* | 2480608 | 2522189 | 41582 | Saccharopolyspora erythraea NRRL 2338, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
| NC_006361:2225072* | 2225072 | 2256780 | 31709 | Nocardia farcinica IFM 10152, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_008392:666000 | 666000 | 688945 | 22946 | Burkholderia cepacia AMMD chromosome 3, complete sequence | 5e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_015957:2678544* | 2678544 | 2711627 | 33084 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_018750:770500 | 770500 | 794378 | 23879 | Streptomyces venezuelae ATCC 10712, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_021064:816000* | 816000 | 839913 | 23914 | Propionibacterium avidum 44067, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_013131:4356247 | 4356247 | 4382381 | 26135 | Catenulispora acidiphila DSM 44928, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
| NC_020064:3825916* | 3825916 | 3852923 | 27008 | Serratia marcescens FGI94, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_014831:2397563 | 2397563 | 2420266 | 22704 | Thermaerobacter marianensis DSM 12885 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_015671:1865752* | 1865752 | 1885819 | 20068 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_015671:3470903* | 3470903 | 3495015 | 24113 | Cellvibrio gilvus ATCC 13127 chromosome, complete genome | 8e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_011894:7563668* | 7563668 | 7602323 | 38656 | Methylobacterium nodulans ORS 2060, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015514:477935 | 477935 | 500795 | 22861 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_015514:181773 | 181773 | 205349 | 23577 | Cellulomonas fimi ATCC 484 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_020302:146807 | 146807 | 170142 | 23336 | Corynebacterium halotolerans YIM 70093 = DSM 44683, complete | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_013169:87269 | 87269 | 110609 | 23341 | Kytococcus sedentarius DSM 20547, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_019673:8161242* | 8161242 | 8187342 | 26101 | Saccharothrix espanaensis DSM 44229 complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_012803:1552122* | 1552122 | 1579960 | 27839 | Micrococcus luteus NCTC 2665, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020181:421941 | 421941 | 448005 | 26065 | Enterobacter aerogenes EA1509E, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020302:85821 | 85821 | 140742 | 54922 | Corynebacterium halotolerans YIM 70093 = DSM 44683, complete | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015434:666692* | 666692 | 704599 | 37908 | Verrucosispora maris AB-18-032 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015312:5240653 | 5240653 | 5265965 | 25313 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010617:774914 | 774914 | 828233 | 53320 | Kocuria rhizophila DC2201, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_010617:1910388 | 1910388 | 1928876 | 18489 | Kocuria rhizophila DC2201, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_007333:2093167* | 2093167 | 2117099 | 23933 | Thermobifida fusca YX, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |