Pre_GI: BLASTN Hits

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Query: NC_004668:295417 Enterococcus faecalis V583, complete genome

Start: 295417, End: 313924, Length: 18508

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015558:905227*90522793037825152Streptococcus parauberis KCTC 11537 chromosome, complete genome2e-1591.7BLASTN svgBLASTP svg
NC_010079:15643271564327160887644550Staphylococcus aureus subsp. aureus USA300_TCH1516, complete2e-1385.7BLASTN svgBLASTP svg
NC_003923:15335001533500155786524366Staphylococcus aureus subsp. aureus MW2, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002953:998944998944101716318220Staphylococcus aureus subsp. aureus MSSA476, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002952:15920001592000162211730118Staphylococcus aureus subsp. aureus MRSA252, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002951:35102935102938944738419Staphylococcus aureus subsp. aureus COL, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_004070:14311461431146145045819313Streptococcus pyogenes MGAS315, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004606:44642744642746823121805Streptococcus pyogenes SSI-1, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_006086:35599355998141045812Streptococcus pyogenes MGAS10394, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012471:20809022080902210553324632Streptococcus equi subsp. equi 4047, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008023:1426687*1426687144592719241Streptococcus pyogenes MGAS2096, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008021:1401249*1401249142313521887Streptococcus pyogenes MGAS9429, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_007297:1406796*1406796143163824843Streptococcus pyogenes MGAS5005, complete genome9e-0969.9BLASTN svgBLASTP svg