Pre_GI: BLASTN Hits

Some Help

Query: NC_004663:6104875 Bacteroides thetaiotaomicron VPI-5482, complete genome

Start: 6104875, End: 6129985, Length: 25111

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014933:2195683*2195683221759921917Bacteroides helcogenes P 36-108 chromosome, complete genome2e-146527BLASTN svgBLASTP svg
NC_015164:29004290045278723784Bacteroides salanitronis DSM 18170 chromosome, complete genome3e-89337BLASTN svgBLASTP svg
NC_004663:39109563910956392962318668Bacteroides thetaiotaomicron VPI-5482, complete genome7e-35157BLASTN svgBLASTP svg
NC_014933:36371723637172366101023839Bacteroides helcogenes P 36-108 chromosome, complete genome1e-20109BLASTN svgBLASTP svg