Pre_GI: BLASTN Hits

Some Help

Query: NC_004663:2935060 Bacteroides thetaiotaomicron VPI-5482, complete genome

Start: 2935060, End: 2958405, Length: 23346

Host Lineage: Bacteroides thetaiotaomicron; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This is the type strain for this organism and was isolated from the feces of a healthy adult. Common gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides thetaiotaomicron is one of the two major Bacteroidesspecies found in the intestine. This organism has been used in studies on gut microflora composition and succession.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006347:451216*45121647695425739Bacteroides fragilis YCH46, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003228:40151340151342352122009Bacteroides fragilis NCTC 9343, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004663:4610456*4610456463186021405Bacteroides thetaiotaomicron VPI-5482, complete genome3e-0661.9BLASTN svgBLASTP svg