Pre_GI: BLASTN Hits

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Query: NC_004551:100840 Tropheryma whipplei TW08/27, complete genome

Start: 100840, End: 124683, Length: 23844

Host Lineage: Tropheryma whipplei; Tropheryma; Cellulomonadaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from the cerebrospinal fluid a woman who had suffered severe weight loss in Germany. The patient had been treated with antibiotics followed by a year of no treatment prior to the sample being taken. This bacterium is the causative agent of Whipple's disease. Whipple did not associate the disease with any bacterial agent, and it was only in 1961 when bacteria were detected in electron microphotographs of affected tissues that the connection was made. The bacterium cannot be cultured apart from its eukaryotic host, and it grows very slowly (reported duplication time 4-17 days).




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013510:3117837*3117837315092333087Thermomonospora curvata DSM 43183, complete genome2e-28135BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome1e-23119BLASTN svgBLASTP svg
NC_013757:3100515*3100515312110420590Geodermatophilus obscurus DSM 43160, complete genome3e-21111BLASTN svgBLASTP svg
NC_018720:993869*993869102159927731Bifidobacterium asteroides PRL2011 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_014318:5586287*5586287562248536199Amycolatopsis mediterranei U32 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_013169:1545890*1545890156556719678Kytococcus sedentarius DSM 20547, complete genome1e-20109BLASTN svgBLASTP svg
NC_006361:2225072*2225072225678031709Nocardia farcinica IFM 10152, complete genome1e-20109BLASTN svgBLASTP svg
NC_008611:3579500*3579500360709927600Mycobacterium ulcerans Agy99, complete genome5e-20107BLASTN svgBLASTP svg
NC_020133:24219652421965244809926135Mycobacterium liflandii 128FXT, complete genome5e-20107BLASTN svgBLASTP svg
NC_015125:222231*22223126106738837Microbacterium testaceum StLB037, complete genome8e-19103BLASTN svgBLASTP svg
NC_012669:2399649*2399649242257022922Beutenbergia cavernae DSM 12333, complete genome3e-18101BLASTN svgBLASTP svg
NC_018681:3541484*3541484357298031497Nocardia brasiliensis ATCC 700358 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014391:2579919*2579919261467434756Micromonospora aurantiaca ATCC 27029 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010572:1081236*1081236110592624691Streptomyces griseus subsp. griseus NBRC 13350, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013521:2193203*2193203221998826786Sanguibacter keddieii DSM 10542, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013595:3388000*3388000341046122462Streptosporangium roseum DSM 43021, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_019673:1988853*1988853204493756085Saccharothrix espanaensis DSM 44229 complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_016048:4047922*4047922409182743906Oscillibacter valericigenes Sjm18-20, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014414:16780316780318582918027Parvularcula bermudensis HTCC2503 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009142:1242850*1242850126110818259Saccharopolyspora erythraea NRRL 2338, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020409:393329*39332943297939651Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_015312:1265797*1265797133663070834Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014010:175500*17550020109925600Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_015703:3880903*3880903392459643694Runella slithyformis DSM 19594 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008601:246583*24658327938032798Francisella tularensis subsp. novicida U112, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014758:1489761*1489761151270922949Calditerrivibrio nitroreducens DSM 19672 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_012881:3520956*3520956354109920144Desulfovibrio salexigens DSM 2638, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012881:2310141*2310141233309622956Desulfovibrio salexigens DSM 2638, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg