Query: NC_004551:100840 Tropheryma whipplei TW08/27, complete genome
Start: 100840, End: 124683, Length: 23844
Host Lineage: Tropheryma whipplei; Tropheryma; Cellulomonadaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from the cerebrospinal fluid a woman who had suffered severe weight loss in Germany. The patient had been treated with antibiotics followed by a year of no treatment prior to the sample being taken. This bacterium is the causative agent of Whipple's disease. Whipple did not associate the disease with any bacterial agent, and it was only in 1961 when bacteria were detected in electron microphotographs of affected tissues that the connection was made. The bacterium cannot be cultured apart from its eukaryotic host, and it grows very slowly (reported duplication time 4-17 days).
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_013510:3117837* | 3117837 | 3150923 | 33087 | Thermomonospora curvata DSM 43183, complete genome | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_012803:1519138 | 1519138 | 1537823 | 18686 | Micrococcus luteus NCTC 2665, complete genome | 1e-23 | 119 | BLASTN svg | BLASTP svg |
NC_013757:3100515* | 3100515 | 3121104 | 20590 | Geodermatophilus obscurus DSM 43160, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_018720:993869* | 993869 | 1021599 | 27731 | Bifidobacterium asteroides PRL2011 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_014318:5586287* | 5586287 | 5622485 | 36199 | Amycolatopsis mediterranei U32 chromosome, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_013169:1545890* | 1545890 | 1565567 | 19678 | Kytococcus sedentarius DSM 20547, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_006361:2225072* | 2225072 | 2256780 | 31709 | Nocardia farcinica IFM 10152, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_008611:3579500* | 3579500 | 3607099 | 27600 | Mycobacterium ulcerans Agy99, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_020133:2421965 | 2421965 | 2448099 | 26135 | Mycobacterium liflandii 128FXT, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
NC_015125:222231* | 222231 | 261067 | 38837 | Microbacterium testaceum StLB037, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_012669:2399649* | 2399649 | 2422570 | 22922 | Beutenbergia cavernae DSM 12333, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_018681:3541484* | 3541484 | 3572980 | 31497 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_014391:2579919* | 2579919 | 2614674 | 34756 | Micromonospora aurantiaca ATCC 27029 chromosome, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010572:1081236* | 1081236 | 1105926 | 24691 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_003888:7561923* | 7561923 | 7647787 | 85865 | Streptomyces coelicolor A3(2), complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_013521:2193203* | 2193203 | 2219988 | 26786 | Sanguibacter keddieii DSM 10542, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_013595:3388000* | 3388000 | 3410461 | 22462 | Streptosporangium roseum DSM 43021, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_019673:1988853* | 1988853 | 2044937 | 56085 | Saccharothrix espanaensis DSM 44229 complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_014168:1294000* | 1294000 | 1325342 | 31343 | Segniliparus rotundus DSM 44985 chromosome, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_016048:4047922* | 4047922 | 4091827 | 43906 | Oscillibacter valericigenes Sjm18-20, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_014414:167803 | 167803 | 185829 | 18027 | Parvularcula bermudensis HTCC2503 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_009142:1242850* | 1242850 | 1261108 | 18259 | Saccharopolyspora erythraea NRRL 2338, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_020409:393329* | 393329 | 432979 | 39651 | Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015312:1265797* | 1265797 | 1336630 | 70834 | Pseudonocardia dioxanivorans CB1190 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014010:175500* | 175500 | 201099 | 25600 | Candidatus Puniceispirillum marinum IMCC1322 chromosome, complete | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015703:3880903* | 3880903 | 3924596 | 43694 | Runella slithyformis DSM 19594 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018868:569423* | 569423 | 619044 | 49622 | Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013166:1841446* | 1841446 | 1859693 | 18248 | Kangiella koreensis DSM 16069, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008601:246583* | 246583 | 279380 | 32798 | Francisella tularensis subsp. novicida U112, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014758:1489761* | 1489761 | 1512709 | 22949 | Calditerrivibrio nitroreducens DSM 19672 chromosome, complete | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012881:3520956* | 3520956 | 3541099 | 20144 | Desulfovibrio salexigens DSM 2638, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012881:2310141* | 2310141 | 2333096 | 22956 | Desulfovibrio salexigens DSM 2638, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007519:3240864* | 3240864 | 3266413 | 25550 | Desulfovibrio alaskensis G20 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |