Query: NC_004347:4541742 Shewanella oneidensis MR-1, complete genome
Start: 4541742, End: 4566116, Length: 24375
Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_010506:537833 | 537833 | 561880 | 24048 | Shewanella woodyi ATCC 51908, complete genome | 2e-75 | 291 | BLASTN svg | BLASTP svg |
| NC_009831:5107924 | 5107924 | 5127733 | 19810 | Shewanella sediminis HAW-EB3, complete genome | 9e-59 | 236 | BLASTN svg | BLASTP svg |
| NC_010634:166900 | 166900 | 190179 | 23280 | Yersinia pseudotuberculosis PB1/+, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_006155:172313 | 172313 | 195599 | 23287 | Yersinia pseudotuberculosis IP 32953, complete genome | 6e-26 | 127 | BLASTN svg | BLASTP svg |
| NC_013282:4312791* | 4312791 | 4335974 | 23184 | Cronobacter turicensis, complete genome | 4e-24 | 121 | BLASTN svg | BLASTP svg |
| NC_020260:4029951* | 4029951 | 4051106 | 21156 | Cronobacter sakazakii Sp291, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_009778:4014026 | 4014026 | 4044233 | 30208 | Enterobacter sakazakii ATCC BAA-894, complete genome | 5e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_006138:799174* | 799174 | 827599 | 28426 | Desulfotalea psychrophila LSv54, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
| NC_014972:3771642 | 3771642 | 3794625 | 22984 | Desulfobulbus propionicus DSM 2032 chromosome, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010468:49074* | 49074 | 69373 | 20300 | Escherichia coli ATCC 8739, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_011184:2840713* | 2840713 | 2858599 | 17887 | Vibrio fischeri MJ11 chromosome I, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| CP002516:44744* | 44744 | 74991 | 30248 | Escherichia coli KO11, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |