Pre_GI: BLASTN Hits

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Query: NC_004347:4541742 Shewanella oneidensis MR-1, complete genome

Start: 4541742, End: 4566116, Length: 24375

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010506:53783353783356188024048Shewanella woodyi ATCC 51908, complete genome2e-75291BLASTN svgBLASTP svg
NC_009831:51079245107924512773319810Shewanella sediminis HAW-EB3, complete genome9e-59236BLASTN svgBLASTP svg
NC_010634:16690016690019017923280Yersinia pseudotuberculosis PB1/+, complete genome6e-26127BLASTN svgBLASTP svg
NC_006155:17231317231319559923287Yersinia pseudotuberculosis IP 32953, complete genome6e-26127BLASTN svgBLASTP svg
NC_013282:4312791*4312791433597423184Cronobacter turicensis, complete genome4e-24121BLASTN svgBLASTP svg
NC_020260:4029951*4029951405110621156Cronobacter sakazakii Sp291, complete genome1e-20109BLASTN svgBLASTP svg
NC_009778:40140264014026404423330208Enterobacter sakazakii ATCC BAA-894, complete genome5e-20107BLASTN svgBLASTP svg
NC_006138:799174*79917482759928426Desulfotalea psychrophila LSv54, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014972:37716423771642379462522984Desulfobulbus propionicus DSM 2032 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_011184:2840713*2840713285859917887Vibrio fischeri MJ11 chromosome I, complete sequence1e-0869.9BLASTN svgBLASTP svg
CP002516:44744*447447499130248Escherichia coli KO11, complete genome5e-0867.9BLASTN svgBLASTP svg