Pre_GI: BLASTN Hits

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Query: NC_002952:610462 Staphylococcus aureus subsp. aureus MRSA252, complete genome

Start: 610462, End: 630675, Length: 20214

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a hospital-acquired strain isolated in the United Kingdom, representative of the methicillin-resistant (MRSA) strains. It is one of the two major MRSA strains found in British hospitals in the late 1990's. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. Continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003923:59100059100061534324344Staphylococcus aureus subsp. aureus MW2, complete genome011000BLASTN svgBLASTP svg
NC_002953:58843758843761403425598Staphylococcus aureus subsp. aureus MSSA476, complete genome011000BLASTN svgBLASTP svg
NC_007622:56750056750058887821379Staphylococcus aureus RF122, complete genome010920BLASTN svgBLASTP svg
NC_002758:62200062200064387421875Staphylococcus aureus subsp. aureus Mu50, complete genome08278BLASTN svgBLASTP svg
NC_002745:59794759794761962721681Staphylococcus aureus subsp. aureus N315, complete genome08278BLASTN svgBLASTP svg
NC_007795:54178354178356019718415Staphylococcus aureus subsp. aureus NCTC 8325, complete genome08266BLASTN svgBLASTP svg
NC_002951:62346162346164703323573Staphylococcus aureus subsp. aureus COL, complete genome08266BLASTN svgBLASTP svg
NC_010079:60700060700062610719108Staphylococcus aureus subsp. aureus USA300_TCH1516, complete08003BLASTN svgBLASTP svg
NC_007793:60650060650062556519066Staphylococcus aureus subsp. aureus USA300, complete genome07919BLASTN svgBLASTP svg
NC_007168:24153612415361243618320823Staphylococcus haemolyticus JCSC1435, complete genome0658BLASTN svgBLASTP svg
NC_004461:277291*27729132456847278Staphylococcus epidermidis ATCC 12228, complete genome3e-132480BLASTN svgBLASTP svg
NC_013893:2373730*2373730239918425455Staphylococcus lugdunensis HKU09-01 chromosome, complete genome3e-129470BLASTN svgBLASTP svg
NC_011567:1*13972539725Anoxybacillus flavithermus WK1, complete genome5e-23117BLASTN svgBLASTP svg
NC_014934:3218423*3218423324209923677Cellulophaga algicola DSM 14237 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014976:2231984*2231984225555323570Bacillus subtilis BSn5 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002951:49535495357109921565Staphylococcus aureus subsp. aureus COL, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015697:33665*336655730923645Lactobacillus reuteri SD2112 chromosome, complete genome9e-0660BLASTN svgBLASTP svg