Pre_GI: BLASTN Hits

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Query: NC_002940:919175 Haemophilus ducreyi 35000HP, complete genome

Start: 919175, End: 942975, Length: 23801

Host Lineage: Haemophilus ducreyi; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: This strain is a human passage derivative of Haemophilus ducreyi strain 35000 that is serum-resistant. Causative agent of chancroid. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is an obligate human pathogen that causes the sexually transmitted disease chancroid (ulcer of the genital region) and it enhances the transmission of HIV (which enhances Haemophilus ducreyi transmission in turn). This organism is an apparent extracellular pathogen that resists phagocytosis. Some of the virulence factors include an outer membrane serum resistance protein, as well as two toxins, cytolethal distending toxin (CDT) and hemolysin, both of which contribute to tissue destruction.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002940:1234410*1234410125802923620Haemophilus ducreyi 35000HP, complete genome012260BLASTN svgBLASTP svg
NC_008309:555680*55568057929723618Haemophilus somnus 129PT, complete genome2e-28135BLASTN svgBLASTP svg
NC_002663:62500625008653124032Pasteurella multocida subsp. multocida str. Pm70, complete genome5e-1177.8BLASTN svgBLASTP svg