Pre_GI: BLASTP Hits

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Query: NC_020207:1906803:1913507 Enterococcus faecium NRRL B-2354, complete genome

Start: 1913507, End: 1913920, Length: 414

Host Lineage: Enterococcus faecium; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen causes a range of infections similar to those observed with Enterococcus faecalis, including urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart). Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains and has led to the rise of vancomycin-resistant Staphylococcus aureus strains due to the horizontal transfer of Enterococcus antibiotic resistance genes. Little is known about the virulence mechanisms in this organism, but the genome does encode an esp gene for the surface adhesin. Vancomycin resistant isolates are more typically Enterococcus faecium than Enterococcus faecalis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020207:1170000:117490411749041175317414Enterococcus faecium NRRL B-2354, complete genomePhage transcriptional activator ArpU1e-67254
NC_016052:1839763:184525018452501845663414Tetragenococcus halophilus NBRC 12172, complete genomeputative autolysin regulatory protein ArpU6e-39159
NC_008526:1924761:193240019324001932828429Lactobacillus casei ATCC 334, complete genomehypothetical protein4e-0960.1
NC_010999:1245239:126391212639121264355444Lactobacillus casei, complete genomePutative autolysin regulatory protein arpU2e-0858.2
NC_010999:561914:572582572582573025444Lactobacillus casei, complete genomePutative autolysin regulatory protein arpU3e-0857
NC_008526:506263:515647515647516090444Lactobacillus casei ATCC 334, complete genomehypothetical protein5e-0856.6