Pre_GI: BLASTP Hits

Some Help

Query: NC_018080:6048516:6083673 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 6083673, End: 6085385, Length: 1713

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:47504:5854358543602551713Pseudomonas poae RE*1-1-14, complete genomeUvrD/REP helicase0958
NC_017075:1869326:1893071189307118947801710Rubrivivax gelatinosus IL144, complete genomeputative ATP-dependent helicase0700
NC_010002:4544818:4555899455589945575511653Delftia acidovorans SPH-1, complete genomeUvrD/REP helicase0634
NC_010170:4533416:4538848453884845405001653Bordetella petrii, complete genomehypothetical protein2e-180632
NC_010725:3273261:3281104328110432829301827Methylobacterium populi BJ001, complete genomeUvrD/REP helicase1e-93344
NC_009720:3377071:3386410338641033882361827Xanthobacter autotrophicus Py2, complete genomeUvrD/REP helicase1e-93343
NC_009720:750612:7553137553137571001788Xanthobacter autotrophicus Py2, complete genomeUvrD/REP helicase4e-85315
NC_008752:3511006:3517941351794135197521812Acidovorax avenae subsp. citrulli AAC00-1, complete genomeUvrD/REP helicase1e-82307
NC_015381:2859000:2869878286987828716111734Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA helicase7e-62238
NC_012483:3731542:3763393376339337650931701Acidobacterium capsulatum ATCC 51196, complete genomehelicase, UvrD/REP family2e-57224
NC_018750:6132619:6133936613393661356451710Streptomyces venezuelae ATCC 10712, complete genomeATP-dependent DNA helicase UvrD or PcrA2e-57224
NC_008782:2568027:2612889261288926146491761Acidovorax sp. JS42, complete genomeUvrD/REP helicase3e-57223
NC_011386:136223:1629261629261646291704Oligotropha carboxidovorans OM5, complete genomeUvrD/REP helicase5e-57222
NC_015684:362236:3640803640803657831704Oligotropha carboxidovorans OM5 chromosome, complete genomeDNA helicase, UvrD/Rep family protein5e-57222
NC_009656:6224221:626114262611426261360219Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-1995.9
NC_011830:720756:7207567207567225641809Desulfitobacterium hafniense DCB-2, complete genomeUvrD/REP helicase3e-0757.4
NC_015682:150808:1749901749901773082319Thermodesulfobacterium sp. OPB45 chromosome, complete genomeUvrD/REP helicase4e-0757
NC_014970:928240:9282409282409301591920Mycoplasma haemofelis str. Langford 1, complete genomeATP-dependent DNA helicase UvrD/PcrA6e-0756.2
NC_013665:918313:9634339634339666963264Methanocella paludicola SANAE, complete genomeputative ATP-dependent DNA helicase1e-0655.1
NC_015573:1671000:1688552168855216907562205Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeATP-dependent DNA helicase PcrA2e-0654.7
NC_015161:927152:9336859336859359882304Deinococcus proteolyticus MRP chromosome, complete genomeUvrD/REP helicase2e-0654.3
NC_010278:1467146:1468739146873914709372199Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA-dependent helicase II7e-0652.8