Pre_GI: BLASTP Hits

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Query: NC_018080:6048516:6078283 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 6078283, End: 6079515, Length: 1233

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:331610:3501523501523513841233Pseudomonas putida ND6 chromosome, complete genomemajor facilitator transporter7e-160563
NC_015733:5909821:5914801591480159160421242Pseudomonas putida S16 chromosome, complete genomemajor facilitator transporter4e-157554
NC_008577:613958:6289046289046301721269Shewanella sp. ANA-3 chromosome 1, complete sequencemajor facilitator superfamily MFS_17e-125447
NC_008820:968423:9884139884139896601248Prochlorococcus marinus str. MIT 9303, complete genomemultidrug efflux transporter, MFS family protein7e-79294
NC_005071:1064000:1076766107676610780371272Prochlorococcus marinus str. MIT 9313, complete genomemultidrug efflux transporter, MFS family1e-75283
NC_009720:4367584:4384222438422243854811260Xanthobacter autotrophicus Py2, complete genomemajor facilitator transporter5e-68258
NC_005042:1422000:1434616143461614358841269Prochlorococcus marinus subsp. marinus str. CCMP1375, completePermease of the major facilitator superfamily4e-47189