Pre_GI: BLASTP Hits

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Query: NC_018080:5091772:5113711 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5113711, End: 5114199, Length: 489

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:459348245934824593970489Pseudomonas aeruginosa PA7 chromosome, complete genomesingle-stranded DNA-binding protein9e-75278
NC_008463:5246954:526630352663035266773471Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative single-stranded DNA binding protein1e-70265
NC_004129:5373886:539160953916095392115507Pseudomonas fluorescens Pf-5, complete genomesingle-strand DNA-binding protein1e-53208
NC_007005:1705406:171292517129251713389465Pseudomonas syringae pv. syringae B728a, complete genomesingle-strand DNA-binding protein7e-40162
NC_008344:49039:115039115039115440402Nitrosomonas eutropha C91, complete genomesingle-strand binding protein/Primosomal replication protein n1e-33142
NC_010170:1324758:135992313599231360366444Bordetella petrii, complete genomessb21e-33142
NC_008752:585884:606698606698607084387Acidovorax avenae subsp. citrulli AAC00-1, complete genomesingle-strand binding protein/Primosomal replication protein n8e-33139
NC_012660:2143376:214556521455652146035471Pseudomonas fluorescens SBW25 chromosome, complete genomesingle-stranded DNA-binding protein5e-31133
NC_015379:2417312:245817024581702458565396Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative single-strand binding protein5e-31133
NC_013421:1780722:179879717987971799198402Pectobacterium wasabiae WPP163, complete genomesingle-strand binding protein/Primosomal replication protein n1e-30132
NC_009512:3282500:330833133083313308759429Pseudomonas putida F1, complete genomesingle-strand binding protein/Primosomal replication protein n1e-30132
NC_016830:3869572:393461839346183935088471Pseudomonas fluorescens F113 chromosome, complete genomeSingle-stranded DNA-binding protein in PFGI-1-like cluster7e-31132
NC_007086:2477040:247933224793322479772441Xanthomonas campestris pv. campestris str. 8004, complete genomesingle-strand DNA-binding protein1e-28125
NC_010688:2781624:280600728060072806447441Xanthomonas campestris pv. campestris, complete genomesingle-stranded DNA binding protein2e-28125
NC_002488:1638946:169685216968521697304453Xylella fastidiosa 9a5c, complete genomesingle-strand DNA-binding protein3e-28124
NC_012691:2614603:262932726293272629728402Tolumonas auensis DSM 9187, complete genomesingle-strand binding protein/Primosomal replication protein n3e-28124
NC_010170:1103224:110382611038261104278453Bordetella petrii, complete genomessb13e-28124
NC_010170:4533416:456630445663044566744441Bordetella petrii, complete genomessb68e-28122
NC_009138:1974935:199045419904541990894441Herminiimonas arsenicoxydans, complete genomeputative single-stranded DNA binding protein1e-27122
NC_010170:1498253:150176915017691502209441Bordetella petrii, complete genomessb31e-27122
NC_014532:3555550:356373935637393564266528Halomonas elongata DSM 2581, complete genomeK03111 single-strand DNA-binding protein4e-25113