Pre_GI: BLASTP Hits

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Query: NC_018080:3055358:3070810 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 3070810, End: 3071184, Length: 375

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014107:171170:173149173149173505357Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,cupin 2 barrel protein5e-53206
NC_012857:1097400:111849111184911118973483Ralstonia pickettii 12D chromosome 2, complete genomeCupin 2 conserved barrel domain protein1e-36151
NC_009434:3611738:362669036266903627184495Pseudomonas stutzeri A1501, complete genomedouble-stranded beta-helix domain-containing protein7e-36149
NC_006576:2073163:209137820913782091731354Synechococcus elongatus PCC 6301, complete genomehypothetical protein8e-23105
NC_016616:134449:160150160150160503354Dechlorosoma suillum PS chromosome, complete genomecupin domain-containing protein3e-2097.1
NC_007298:2769525:279002227900222790393372Dechloromonas aromatica RCB, complete genomeCupin region9e-1992
NC_015422:3836911:384315938431593843521363Alicycliphilus denitrificans K601 chromosome, complete genomecupin 2 barrel domain-containing protein9e-1785.5
NC_017277:1362082:137853213785321378939408Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1478.6
NC_017052:1362280:137873013787301379137408Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-1478.6
NC_017039:1362292:137874213787421379149408Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-1478.6
NC_000911:1358846:137971513797151380122408Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-1478.6
NC_011830:4645453:465087646508764651229354Desulfitobacterium hafniense DCB-2, complete genomeCupin 2 conserved barrel domain protein1e-1375.1