Pre_GI: BLASTP Hits

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Query: NC_018080:2288700:2299495 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 2299495, End: 2300754, Length: 1260

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:2362725:2373006237300623742801275Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative cytoplasmic protein3e-88325
NC_003198:1771432:1804670180467018059351266Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein7e-88324
NC_013851:3166969:3178950317895031802091260Allochromatium vinosum DSM 180 chromosome, complete genomehypothetical protein7e-78291