Pre_GI: BLASTP Hits

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Query: NC_017328:3655876:3658358 Shigella flexneri 2002017 chromosome, complete genome

Start: 3658358, End: 3658531, Length: 174

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. Extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012947:248000:262497262497262670174Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-24110
NC_010498:3838419:385924138592413859414174Escherichia coli SMS-3-5, complete genomehypothetical protein9e-24108
NC_016902:246767:262604262604262777174Escherichia coli KO11FL chromosome, complete genomehypothetical protein5e-23106
CP002516:246767:262604262604262777174Escherichia coli KO11, complete genomehypothetical protein5e-23106
CP002185:3822470:384329638432963843469174Escherichia coli W, complete genomeconserved hypothetical protein5e-23106
NC_011741:3709081:371150637115063711685180Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-23106
CU928145:3983432:401261840126184012797180Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein5e-23106
CU928160:3709081:371150637115063711685180Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein5e-23106
NC_011748:3983432:401261840126184012797180Escherichia coli 55989, complete genomehypothetical protein5e-23106