Pre_GI: BLASTP Hits

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Query: NC_017328:2225418:2225418 Shigella flexneri 2002017 chromosome, complete genome

Start: 2225418, End: 2226470, Length: 1053

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. Extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010468:1694729:1716433171643317174851053Escherichia coli ATCC 8739, complete genomeFructose-bisphosphate aldolase0693
NC_011750:955451:9777179777179787691053Escherichia coli IAI39 chromosome, complete genomefructose-bisphosphate aldolase0692
NC_011740:2220251:2223312222331222243641053Escherichia fergusonii ATCC 35469, complete genomefructose-bisphosphate aldolase class I0686
NC_009792:642881:6615036615036625551053Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein0677
NC_014121:3483976:3483976348397634850281053Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completefructose-bisphosphate aldolase0677
NC_015968:3053565:3064990306499030660421053Enterobacter asburiae LF7a chromosome, complete genomedeoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase0674
NC_003198:2179688:2200548220054822016001053Salmonella enterica subsp. enterica serovar Typhi str. CT18,fructose-bisphosphate aldolase0669
NC_006511:792543:7950697950697961211053Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCfructose-bisphosphate aldolase0669
NC_006905:2235607:2257483225748322585351053Salmonella enterica subsp. enterica serovar Choleraesuis strfructose-bisphosphate aldolase0669
NC_011149:2179592:2200555220055522016071053Salmonella enterica subsp. enterica serovar Agona str. SL483,0669
NC_004631:799810:8023368023368033881053Salmonella enterica subsp. enterica serovar Typhi Ty2, completefructose-bisphosphate aldolase0669
NC_011147:792489:7950157950157960671053Salmonella enterica subsp. enterica serovar Paratyphi A strfructose-bisphosphate aldolase0669
NC_012125:1632150:1634677163467716357291053Salmonella enterica subsp. enterica serovar Paratyphi C strainfructose-bisphosphate aldolase0669
NC_016832:799764:8022908022908033421053Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Fructose-bisphosphate aldolase class 10669
NC_012731:3593000:3593004359300435940561053Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomefructose-bisphosphate aldolase0667
NC_016835:405482:4269634269634280121050Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,DhnA-type fructose-1,6-bisphosphate aldolase-like enzyme3e-172604
NC_016629:3543432:3549892354989235509411050Desulfovibrio africanus str. Walvis Bay chromosome, completedeoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase4e-146517
NC_013959:1428381:1443571144357114446201050Sideroxydans lithotrophicus ES-1 chromosome, complete genomeFructose-bisphosphate aldolase7e-143506
NC_014759:2438492:2448433244843324494851053Marivirga tractuosa DSM 4126 chromosome, complete genomefructose-bisphosphate aldolase4e-125447
NC_019904:3749160:3764361376436137654221062Echinicola vietnamensis DSM 17526 chromosome, complete genomeDhnA-type fructose-1,6-bisphosphate aldolase-like enzyme5e-124444
NC_010830:1836984:1837184183718418382421059Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein7e-123440
NC_013222:299683:3385953385953396531059Robiginitalea biformata HTCC2501, complete genomefructose-bisphosphate aldolase5e-116417
NC_007799:81723:863068630687223918Ehrlichia chaffeensis str. Arkansas, complete genomefructose-biphosphate aldolase, class I8e-37154
NC_006831:76500:769657696577867903Ehrlichia ruminantium str. Gardel, complete genomefructose-bisphosphate aldolase1e-34147
NC_005295:95500:962509625097152903Ehrlichia ruminantium str. Welgevonden, complete genomefructose-bisphosphate aldolase1e-34147
NC_006832:76500:769177691777819903Ehrlichia ruminantium str. Welgevonden, complete genomefructose-bisphosphate aldolase1e-34147
NC_009484:429269:433567433567434481915Acidiphilium cryptum JF-5 chromosome, complete genomefructose-bisphosphate aldolase4e-33142
NC_015186:535727:538600538600539514915Acidiphilium multivorum AIU301, complete genomefructose-bisphosphate aldolase class I4e-33142
NC_013009:122000:125806125806126699894Neorickettsia risticii str. Illinois, complete genomefructose-bisphosphate aldolase, class I2e-32140
NC_007798:112840:114546114546115502957Neorickettsia sennetsu str. Miyayama, complete genomeputative fructose-bisphosphate aldolase, class I9e-32137
NC_003552:4782635:478263547826354783477843Methanosarcina acetivorans C2A, complete genomehypothetical protein1e-1067.8
NC_003901:860242:860242860242861171930Methanosarcina mazei Go1, complete genomealdolase3e-1066.2
NC_000854:1:807180718889819Aeropyrum pernix K1, complete genomefructose-bisphosphate aldolase class I1e-0757.4
NC_013407:333387:350387350387351304918Methanocaldococcus vulcanius M7, complete genomeFructose-bisphosphate aldolase4e-0756.2
NC_015636:1123053:113832511383251139245921Methanothermococcus okinawensis IH1 chromosome, complete genomedeoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase7e-0755.1
NC_009663:1237336:124546112454611246366906Sulfurovum sp. NBC37-1, complete genomealdolase1e-0654.7
NC_014961:335808:348793348793349611819Desulfurococcus mucosus DSM 2162 chromosome, complete genomefructose-bisphosphate aldolase1e-0654.3
NC_015942:787808:806626806626807546921Acidithiobacillus ferrivorans SS3 chromosome, complete genomedeoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase2e-0653.5