Pre_GI: BLASTP Hits

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Query: NC_017269:303500:303836 Vibrio cholerae LMA3984-4 chromosome II, complete sequence

Start: 303836, End: 304078, Length: 243

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:324519:349742349742349984243Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-38156
NC_016446:49618:749917499175233243Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein3e-38156
NC_014965:1428902:154914115491411549383243Vibrio vulnificus MO6-24/O chromosome I, complete sequencetranscriptional regulator5e-32135
NC_004459:2443000:257061225706122570854243Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted transcriptional regulator5e-32135
NC_010814:2758902:277273727727372772979243Geobacter lovleyi SZ, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family3e-2097.1
NC_010725:5491491:550561555056155505860246Methylobacterium populi BJ001, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family7e-1992.4
NC_008687:965152:967468967468967713246Paracoccus denitrificans PD1222 chromosome 2, complete sequenceputative transcriptional regulators, CopG/Arc/MetJ family4e-1786.7
NC_010831:1224000:125019012501901250441252Chlorobium phaeobacteroides BS1, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family4e-1683.6
NC_014315:2711852:272561627256162725864249Nitrosococcus watsoni C-113 chromosome, complete genomeputative addiction module antidote protein5e-1579.7
NC_013037:1587673:159648015964801596725246Dyadobacter fermentans DSM 18053, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family3e-1167.4
NC_016147:1672482:168567616856761685924249Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein5e-0959.7
NC_007645:4677965:468171346817134681967255Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator containing the CopG/Arc/MetJ DNA-binding domain5e-0856.6
NC_011083:4547825:456313445631344563397264Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative addiction module antidote protein, CC2985 family5e-0856.6
NC_012912:2285778:230426723042672304530264Dickeya zeae Ech1591, complete genomeputative addiction module antidote protein, CopG/Arc/MetJ family8e-0752.4
NC_018691:1322389:133200113320011332267267Alcanivorax dieselolei B5 chromosome, complete genomePutative addiction module antidote protein, CC2985 family1e-0652