Pre_GI: BLASTP Hits

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Query: NC_017265:3063016:3063016 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 3063016, End: 3064659, Length: 1644

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:1783886:1785058178505817867431686Yersinia pestis Pestoides F chromosome, complete genomephosphoglucomutase01095
NC_005810:2739878:2757274275727427589591686Yersinia pestis biovar Microtus str. 91001, complete genomephosphoglucomutase01095
NC_008149:1317109:1334510133451013361951686Yersinia pestis Nepal516, complete genomephosphoglucomutase01095
NC_008150:2681327:2698728269872827004131686Yersinia pestis Antiqua, complete genomephosphoglucomutase01095
NC_004088:1387276:1404611140461114062961686Yersinia pestis KIM, complete genomephosphoglucomutase01095
NC_010159:3779129:3794537379453737961801644Yersinia pestis Angola, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific01093
NC_003143:2992295:3009738300973830113811644Yersinia pestis CO92, complete genomephosphoglucomutase01093
NC_014029:3047506:3064949306494930665921644Yersinia pestis Z176003 chromosome, complete genomephosphoglucomutase01093
NC_017154:2999841:2999841299984130014841644Yersinia pestis D106004 chromosome, complete genomephosphoglucomutase01093
NC_017160:2976683:2989924298992429915671644Yersinia pestis D182038 chromosome, complete genomephosphoglucomutase01093
NC_017168:2751027:2751027275102727526701644Yersinia pestis A1122 chromosome, complete genomephosphoglucomutase01093
NC_009708:1284555:1300168130016813018111644Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephosphoglucomutase01091
NC_010634:3368000:3370146337014633717891644Yersinia pseudotuberculosis PB1/+, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific01091
NC_010465:1273000:1288546128854612901891644Yersinia pseudotuberculosis YPIII, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific01091
NC_006155:3456488:3456488345648834581731686Yersinia pseudotuberculosis IP 32953, complete genomephosphoglucomutase01086
NC_012962:3463644:3466946346694634685861641Photorhabdus asymbiotica, complete genomephosphoglucomutase0879
NC_014221:792363:8152058152058168511647Truepera radiovictrix DSM 17093 chromosome, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific0677
NC_011769:247202:2539512539512556001650Desulfovibrio vulgaris str. 'Miyazaki F', complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific0660
NC_014963:767034:7763617763617780041644Terriglobus saanensis SP1PR4 chromosome, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific0649
NC_014814:3926676:3940232394023239418661635Mycobacterium sp. Spyr1 chromosome, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific0639
NC_016943:4799915:4802043480204348036771635Blastococcus saxobsidens DD2, complete genomephosphomannomutase0635
NC_017303:1836500:1848968184896818506051638Corynebacterium pseudotuberculosis I19 chromosome, complete genomePhosphoglucomutase2e-180632
NC_017300:1833772:1846534184653418481711638Corynebacterium pseudotuberculosis 1002 chromosome, completePhosphoglucomutase3e-180631
NC_013173:815696:8332768332768349191644Desulfomicrobium baculatum DSM 4028, complete genomephosphoglucomutase, alpha-D-glucose phosphate- specific1e-178626
NC_017082:5789534:5789534578953457912221689Bradyrhizobium sp. S23321, complete genomephosphoglucomutase1e-177623
NC_009901:2485965:2487611248761124892571647Shewanella pealeana ATCC 700345, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific8e-176617
NC_015656:1830220:1830220183022018318841665Frankia symbiont of Datisca glomerata chromosome, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific7e-174610
NC_015731:25493:4343443434452001767Nitrosomonas sp. Is79A3 chromosome, complete genomephosphoglucomutase, alpha-D-glucose phosphate-specific2e-173609
NC_016830:3230939:3259751325975132613971647Pseudomonas fluorescens F113 chromosome, complete genomephosphoglucomutase9e-172603
NC_006361:4597718:4621778462177846234661689Nocardia farcinica IFM 10152, complete genomephosphoglucomutase4e-166585
NC_006087:237500:2387402387402403891650Leifsonia xyli subsp. xyli str. CTCB07, complete genomephosphoglucomutase2e-161569
NC_015673:464630:4646304646304663721743Corynebacterium resistens DSM 45100 chromosome, complete genomephosphoglucomutase9e-161567
NC_014215:1190447:1190447119044711920781632Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Phosphoglucomutase1e-157556
NC_011883:1422650:1422650142265014242931644Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,phosphoglucomutase, alpha-D-glucose phosphate-specific9e-157553
NC_014392:1935130:1948849194884919502521404Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I6e-40165
NC_014152:191200:2076502076502090501401Thermincola sp. JR, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I1e-32141
NC_014831:218696:2215482215482231341587Thermaerobacter marianensis DSM 12885 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I3e-25117
NC_010730:1519458:1533629153362915350021374Sulfurihydrogenibium sp. YO3AOP1, complete genomePhosphoglucomutase2e-24114
NC_011126:922182:9288949288949302701377Hydrogenobaculum sp. Y04AAS1, complete genomePhosphomannomutase2e-24114
NC_001264:28266:5106451064524851422Deinococcus radiodurans R1 chromosome 2, complete sequencephospho-sugar mutase, putative2e-24114
NC_017272:607900:6214556214556228281374Thermus thermophilus SG0.5JP17-16 chromosome, complete genomephosphoglucosamine mutase8e-24112
NC_006461:605249:6184246184246197971374Thermus thermophilus HB8, complete genomeputative phosphoglucomutase/phosphomannomutase1e-23112
NC_005835:259702:2805842805842819571374Thermus thermophilus HB27, complete genomephosphoglucomutase/phosphomannomutase1e-23112
NC_013203:1447340:1459146145914614605611416Atopobium parvulum DSM 20469, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I2e-20100
NC_000961:828416:8316308316308329971368Pyrococcus horikoshii OT3, complete genomephospho-sugar mutase1e-1998.6
NC_000918:336232:3382283382283397271500Aquifex aeolicus VF5, complete genomephosphoglucomutase/phosphomannomutase1e-1998.2
NC_011894:2184956:2187377218737721890081632Methylobacterium nodulans ORS 2060, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I2e-1997.4
NC_020411:905335:9141389141389155141377Hydrogenobaculum sp. HO, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I8e-1995.5
NC_015557:905145:9139489139489153241377Hydrogenobaculum sp. 3684 chromosome, complete genomePhosphoglucosamine mutase8e-1995.5
NC_015587:905255:9140589140589154341377Hydrogenobaculum sp. SHO chromosome, complete genomePhosphoglucosamine mutase8e-1995.5
NC_003413:603157:6068056068056081721368Pyrococcus furiosus DSM 3638, complete genomephospho-sugar mutase1e-1895.5
NC_017095:269165:2743832743832758341452Fervidobacterium pennivorans DSM 9078 chromosome, complete genomephosphomannomutase2e-1894.4
NC_000868:1168819:1189702118970211910721371Pyrococcus abyssi GE5, complete genomephosphomannomutase (pmm)4e-1893.6
NC_009718:518873:5213405213405227911452Fervidobacterium nodosum Rt17-B1, complete genomephosphomannomutase7e-1892.4
NC_015696:1853979:1861398186139818630321635Francisella sp. TX077308 chromosome, complete genomephosphoglucomutase2e-1790.9
NC_008025:316302:3554423554423568691428Deinococcus geothermalis DSM 11300, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I5e-1789.7
NC_012489:3425416:3430395343039534320201626Gemmatimonas aurantiaca T-27, complete genomephosphoglucomutase8e-1789
NC_017161:1:1054710547119291383Hydrogenobacter thermophilus TK-6 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I6e-1686.3
NC_013799:1:1048610486118681383Hydrogenobacter thermophilus TK-6, complete genomephosphoglucomutase/phosphomannomutase6e-1686.3
NC_014932:1232346:1284967128496712865951629Bartonella clarridgeiae 73, complete genomephosphoglucomutase7e-1685.9
NC_014972:3227500:3248401324840132501551755Desulfobulbus propionicus DSM 2032 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I2e-1584.3
NC_008319:262894:2834182834182848811464Synechococcus sp. CC9311, complete genomePhosphoglucomutase/phosphomannomutase family protein6e-1479.3
NC_017095:1333810:1338445133844513401661722Fervidobacterium pennivorans DSM 9078 chromosome, complete genomephosphomannomutase7e-1479.3
NC_014363:645397:6453976453976471181722Olsenella uli DSM 7084 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I8e-1479
NC_015690:75223:7522375223769321710Paenibacillus mucilaginosus KNP414 chromosome, complete genomePgcA1e-1378.6
NC_008319:2172928:2188508218850821901541647Synechococcus sp. CC9311, complete genomephosphoglucomutase/phosphomannomutase family protein1e-1378.6
NC_019897:4014485:4066491406649140682001710Thermobacillus composti KWC4 chromosome, complete genomephosphomannomutase1e-1378.2
NC_016935:75186:7518675186768951710Paenibacillus mucilaginosus 3016 chromosome, complete genomeprotein PgcA2e-1377.8
NC_003551:860862:8769578769578783271371Methanopyrus kandleri AV19, complete genomePhosphomannomutase2e-1377.4
NC_013642:545464:5690935690935705081416Thermotoga naphthophila RKU-10, complete genomeGlucose-1,6-bisphosphate synthase2e-1377.4
NC_000853:771746:7953907953907968051416Thermotoga maritima MSB8, complete genomephosphomannomutase4e-1376.6
NC_014363:114239:1581901581901596171428Olsenella uli DSM 7084 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I6e-1376.3
NC_013960:2166367:2166367216636721680011635Nitrosococcus halophilus Nc4 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I6e-1376.3
NC_003366:2143173:2143173214317321449001728Clostridium perfringens str. 13, complete genomeprobable phosphomannomutase7e-1375.9
NC_007516:2090901:2101708210170821033661659Synechococcus sp. CC9605, complete genomephosphoglucomutase1e-1275.5
NC_016051:1385490:1385490138549013868391350Thermococcus sp. AM4 chromosome, complete genomephosphomannomutase / phosphoglucosamine mutase3e-1273.9
NC_011761:2067695:2070717207071720723481632Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completephosphoglucomutase3e-1273.9
NC_008262:2025699:2032005203200520337321728Clostridium perfringens SM101, complete genomephosphomannomutase4e-1273.6
NC_006055:140686:1443401443401460251686Mesoplasma florum L1, complete genomephosphomannomutase/phosphoglucomutase homolog5e-1273.2
NC_006624:1952554:1971867197186719732161350Thermococcus kodakarensis KOD1, complete genomephosphohexomutase8e-1272.4
NC_009712:669647:6802876802876816691383Candidatus Methanoregula boonei 6A8, complete genomephosphomannomutase9e-1272
NC_014216:1061265:1064036106403610657751740Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I5e-1169.7
NC_010475:1563578:1573531157353115749971467Synechococcus sp. PCC 7002, complete genomephosphoglucomutase/phosphomannomutase6e-1169.7
NC_004129:957890:9683869683869697231338Pseudomonas fluorescens Pf-5, complete genomephosphoglucosamine mutase1e-1068.6
NC_010003:2029416:2046323204632320480021680Petrotoga mobilis SJ95, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I2e-1067.8
NC_013926:183057:1946201946201959391320Aciduliprofundum boonei T469 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I4e-1066.6
NC_012913:2074126:2075674207567420773321659Aggregatibacter aphrophilus NJ8700, complete genomephosphoglucomutase/phosphomannomutase5e-1066.2
NC_014328:4387303:4397430439743043987791350Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephosphoglucosamine mutase2e-0964.3
NC_016012:879972:8951928951928969281737Candidatus Arthromitus sp. SFB-rat-Yit, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/subunit4e-0963.5
NC_009901:3317068:3332821333282133345541734Shewanella pealeana ATCC 700345, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I1e-0862
NC_007645:1245927:1246761124676112480981338Hahella chejuensis KCTC 2396, complete genomephosphoglucosamine mutase2e-0861.6
NC_008700:2701500:2706734270673427080921359Shewanella amazonensis SB2B, complete genomephosphoglucosamine mutase2e-0861.2
NC_009654:1123709:1138932113893211402781347Marinomonas sp. MWYL1, complete genomephosphoglucosamine mutase2e-0860.8
NC_013939:1023443:1032872103287210342331362Deferribacter desulfuricans SSM1, complete genomephosphoglucosamine mutase3e-0860.8
NC_021184:592501:6038606038606051941335Desulfotomaculum gibsoniae DSM 7213, complete genomephosphoglucosamine mutase5e-0859.7
NC_015318:1583839:1604759160475916061171359Hippea maritima DSM 10411 chromosome, complete genomephosphoglucosamine mutase6e-0859.7
NC_008601:1733940:1742066174206617433971332Francisella tularensis subsp. novicida U112, complete genomephosphoglucosamine mutase7e-0859.3
NC_020541:2264521:2286313228631322876651353Rhodanobacter sp. 2APBS1, complete genomephosphoglucosamine mutase8e-0859.3
NC_009515:616432:6287026287026300811380Methanobrevibacter smithii ATCC 35061, complete genomephosphomannomutase, ManB1e-0758.9
NC_007880:1703346:1711427171142717127581332Francisella tularensis subsp. holarctica, complete genomephosphoglucosamine mutase9e-0858.9
NC_008369:1702885:1711059171105917123901332Francisella tularensis subsp. holarctica OSU18, complete genomephosphoglucomutase9e-0858.9
NC_009749:1699152:1707326170732617086571332Francisella tularensis subsp. holarctica FTA, complete genomephosphoglucosamine mutase9e-0858.9
NC_021150:4311902:4324819432481943261561338Azotobacter vinelandii CA6, complete genomephosphoglucosamine mutase1e-0758.5
NC_012560:4311906:4324823432482343261601338Azotobacter vinelandii DJ, complete genomephosphoglucosamine mutase1e-0758.5
NC_000918:336232:347383347383348366984Aquifex aeolicus VF5, complete genomehypothetical protein1e-0758.5
NC_005061:96536:1087721087721101301359Candidatus Blochmannia floridanus, complete genomePGM/PMM-family protein2e-0758.2
NC_016937:66854:8209182091834221332Francisella tularensis subsp. tularensis TI0902 chromosome,phosphoglucosamine mutase2e-0757.8
NC_016933:66854:8209182091834221332Francisella tularensis TIGB03 chromosome, complete genomephosphoglucosamine mutase2e-0757.8
NC_008245:66852:8208982089834201332Francisella tularensis subsp. tularensis FSC 198, complete genomephosphoglucosamine mutase2e-0757.8
NC_004557:2677155:2702536270253627038821347Clostridium tetani E88, complete genomephosphoglucosamine mutase3e-0757.4
NC_015581:771482:7788467788467801831338Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomephosphoglucosamine mutase3e-0757.4
NC_009257:151737:1669741669741683051332Francisella tularensis subsp. tularensis WY96-3418 chromosome,phosphoglucosamine mutase4e-0757
NC_015589:366296:3682843682843696181335Desulfotomaculum ruminis DSM 2154 chromosome, complete genomephosphoglucosamine mutase6e-0756.2
NC_015565:287900:2918482918482931821335Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completephosphoglucosamine mutase2e-0654.3
NC_010001:473354:4771024771024784481347Clostridium phytofermentans ISDg, complete genomephosphoglucosamine mutase2e-0654.3
NC_011653:1728000:1734085173408517353771293Thermosipho africanus TCF52B, complete genomephosphoglucosamine mutase3e-0653.9
NC_014122:967194:9798879798879811881302Methanocaldococcus infernus ME chromosome, complete genomePhosphoglucosamine mutase4e-0653.5
NC_008345:3394154:3402428340242834037801353Shewanella frigidimarina NCIMB 400, complete genomephosphoglucosamine mutase6e-0653.1
NC_008322:1595500:1616858161685816182101353Shewanella sp. MR-7, complete genomephosphoglucosamine mutase6e-0652.8
NC_016887:1035458:1035458103545810368311374Nocardia cyriacigeorgica GUH-2, complete genomephosphoglucosamine mutase9e-0652.4