Pre_GI: BLASTP Hits

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Query: NC_017265:1571305:1608323 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 1608323, End: 1608670, Length: 348

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010465:1790739:180624318062431806662420Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein1e-40165
NC_017160:2787637:2821119282111928226901572Yersinia pestis D182038 chromosome, complete genomehemagglutinin-like secreted protein3e-27120
NC_005810:2549680:2556047255604725637717725Yersinia pestis biovar Microtus str. 91001, complete genomeputative hemolysin3e-27120
NC_004088:1851500:1883637188363718856822046Yersinia pestis KIM, complete genomehemagglutinin-like secreted protein2e-27120
NC_010159:1794000:1800454180045418025052052Yersinia pestis Angola, complete genomehypothetical protein2e-27120
NC_008149:2337336:2348272234827223503052034Yersinia pestis Nepal516, complete genomehypothetical protein2e-27120
NC_008150:2207198:2218134221813422201672034Yersinia pestis Antiqua, complete genomehypothetical protein2e-27120
NC_003143:2778494:2786419278641927884522034Yersinia pestis CO92, complete genomehypothetical protein2e-27120
NC_009381:2138625:2138625213862521406582034Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-27120
NC_014029:2729832:2738741273874127407742034Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-27120
NC_017168:2941938:2973984297398429760172034Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-27120
NC_017265:1571305:1604730160473016067632034Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-27120
NC_010634:4045794:404903440490344049846813Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-26117
NC_006155:4105542:410878241087824109594813Yersinia pseudotuberculosis IP 32953, complete genome2e-26117
NC_009708:588102:6107596107596126811923Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-26117
NC_014618:4657719:466964746696474670438792Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein9e-2199
NC_012962:3499900:353653335365333537444912Photorhabdus asymbiotica, complete genomesimilar to hemagglutinin-like secreted protein. putative secrete protein2e-1994.4
NC_012962:1661683:167993316799331680652720Photorhabdus asymbiotica, complete genomehypothetical protein3e-1890.1
NC_017154:2774955:278649027864902787104615Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-1580.9