Pre_GI: BLASTP Hits

Some Help

Query: NC_017249:8221992:8257954 Bradyrhizobium japonicum USDA 6, complete genome

Start: 8257954, End: 8258388, Length: 435

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:1992000:200121620012162001650435Bradyrhizobium japonicum USDA 110, complete genomeVirK protein homolog6e-67252
NC_014307:1131241:115213811521381152593456Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein5e-1166.2
NC_006351:881655:894966894966895400435Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein1e-1065.1
NC_009075:937782:951090951090951524435Burkholderia pseudomallei 668 chromosome II, complete sequencehypothetical protein3e-1063.9
NC_009078:862796:876102876102876536435Burkholderia pseudomallei 1106a chromosome II, complete sequencehypothetical protein3e-1063.5
NC_002488:1812696:184801818480181848455438Xylella fastidiosa 9a5c, complete genomeVirK protein2e-0651.6
NC_008752:1523768:152496415249641525404441Acidovorax avenae subsp. citrulli AAC00-1, complete genomeVirK family protein4e-0650.4