Pre_GI: BLASTP Hits

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Query: NC_017249:4398000:4406302 Bradyrhizobium japonicum USDA 6, complete genome

Start: 4406302, End: 4406664, Length: 363

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:5722468:573756257375625738074513Bradyrhizobium japonicum USDA 110, complete genometwo-component response regulator3e-50196
NC_017249:3229500:323415132341513234390240Bradyrhizobium japonicum USDA 6, complete genometwo-component response regulator9e-28122
NC_003902:3514000:352020735202073520557351Xanthomonas campestris pv. campestris str. ATCC 33913, completetwo-component system regulatory protein4e-1683.2
NC_018000:2054098:206284020628402063205366Sinorhizobium fredii USDA 257 chromosome, complete genomeresponse regulator receiver protein8e-1475.5
NC_013859:61586:749547495475319366Azospirillum sp. B510 plasmid pAB510e, complete sequencetwo component, response regulator3e-1270.5
NC_010510:534024:556031556031556441411Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeresponse regulator receiver protein2e-1167.8
NC_011894:6516856:654159165415916541956366Methylobacterium nodulans ORS 2060, complete genomeresponse regulator receiver protein4e-1167
NC_011757:5048714:508899250889925089354363Methylobacterium chloromethanicum CM4, complete genomeresponse regulator receiver protein7e-1165.9
NC_010172:57500:115718115718116080363Methylobacterium extorquens PA1, complete genomeresponse regulator receiver1e-1065.5
NC_007493:207932:225687225687226076390Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceresponse regulator receiver domain protein1e-0962
NC_011894:5787990:582021858202185820601384Methylobacterium nodulans ORS 2060, complete genomeresponse regulator receiver protein2e-0960.8
NC_010172:798923:833618833618834067450Methylobacterium extorquens PA1, complete genomeresponse regulator receiver9e-0958.9
NC_016584:1998000:202019920201992020765567Desulfosporosinus orientis DSM 765 chromosome, complete genomeresponse regulator with putative antiterminator output domain2e-0857.8
NC_010511:7024412:703470570347057035085381Methylobacterium sp. 4-46 chromosome, complete genomeresponse regulator receiver protein3e-0857.4
NC_017267:2698944:271741527174152717795381Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetwo-component system response regulatory protein3e-0857.4
NC_011757:3540992:3571656357165635728101155Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family6e-0856.2
NC_011757:39881:5967159671608251155Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, Crp/Fnr family6e-0856.2
NC_012988:769981:807269807269807676408Methylobacterium extorquens DM4, complete genomeresponse regulator receiver8e-0855.8
NC_013223:1090397:1100795110079511030052211Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase1e-0755.1
NC_008343:1250869:126166712616671262026360Granulibacter bethesdensis CGDNIH1, complete genomeresponse regulator receiver domain2e-0754.7
NC_011071:1178423:1178423117842311804922070Stenotrophomonas maltophilia R551-3, complete genomePAS/PAC sensor hybrid histidine kinase2e-0754.3
NC_016010:1822212:1902046190204619041182073Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehistidine kinase-response regulator hybrid protein3e-0753.5
NC_016010:1822212:1896930189693018997852856Xanthomonas axonopodis pv. citrumelo F1 chromosome, completesensory box histidine kinase/response regulator hybrid1e-0652
NC_012491:5914500:593353059335305934126597Brevibacillus brevis NBRC 100599, complete genometwo-component response regulator1e-0651.6
NC_011894:6259649:6272210627221062742312022Methylobacterium nodulans ORS 2060, complete genomePAS/PAC sensor hybrid histidine kinase2e-0651.2
NC_010322:3315024:334008633400863340448363Pseudomonas putida GB-1 chromosome, complete genomeresponse regulator receiver protein2e-0651.2
NC_010172:798923:8426678426678437971131Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding3e-0650.8
NC_012988:769981:8174538174538185831131Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator2e-0650.8
NC_014924:2517068:2518503251850325204191917Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase5e-0649.7
NC_009512:2238437:226216822621682262518351Pseudomonas putida F1, complete genomeresponse regulator receiver protein7e-0649.3
NC_017187:691769:696338696338697072735Arcobacter butzleri ED-1, complete genometwo-component response regulator8e-0649.3
NC_016629:2561000:257958525795852579950366Desulfovibrio africanus str. Walvis Bay chromosome, completeresponse regulator receiver protein8e-0649.3
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase9e-0648.9
NC_011757:39881:4793747937503692433Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase9e-0648.9