Pre_GI: BLASTP Hits

Some Help

Query: NC_017249:3406570:3416854 Bradyrhizobium japonicum USDA 6, complete genome

Start: 3416854, End: 3418446, Length: 1593

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005027:5640680:5656076565607656579621887Rhodopirellula baltica SH 1, complete genomeprobable methyltransferase or Fe-S oxidoreductase5e-115415
NC_008820:211616:2295422295422311161575Prochlorococcus marinus str. MIT 9303, complete genomeFe-S oxidoreductase2e-104379
NC_005071:172364:1947251947251962991575Prochlorococcus marinus str. MIT 9313, complete genomehypothetical protein1e-103377
NC_005125:4117096:4132911413291141345091599Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-97355
NC_011837:2567691:2582646258264625841631518Clostridium kluyveri NBRC 12016, complete genomehypothetical protein6e-89328
NC_007517:3344799:3358146335814633596601515Geobacter metallireducens GS-15, complete genomeRadical SAM3e-87323
NC_013173:1259898:1271821127182112733291509Desulfomicrobium baculatum DSM 4028, complete genomeRadical SAM domain protein5e-84312
NC_002939:579087:5814875814875830011515Geobacter sulfurreducens PCA, complete genomeradical SAM domain protein6e-82305
NC_011027:760221:7688807688807703881509Chlorobaculum parvum NCIB 8327, complete genomeRadical SAM domain protein5e-76285
NC_014960:1697818:1733121173312117346291509Anaerolinea thermophila UNI-1, complete genomehypothetical protein6e-76285
NC_002932:1798869:1801054180105418025561503Chlorobium tepidum TLS, complete genomeBchE/P-methylase family protein5e-75282
NC_005125:2456889:2477860247786024794731614Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-67256
NC_015717:1723047:1747028174702817486711644Hyphomicrobium sp. MC1, complete genomeputative methyltransferase4e-65249
NC_011899:1437981:1454795145479514561351341Halothermothrix orenii H 168, complete genomeRadical SAM domain protein5e-34145
NC_015388:719669:7410057410057428791875Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeRadical SAM domain protein9e-29128
NC_009483:3608000:3608342360834236096761335Geobacter uraniireducens Rf4 chromosome, complete genomeradical SAM domain-containing protein5e-27122
NC_013716:2139952:2189275218927521906211347Citrobacter rodentium ICC168, complete genomehypothetical protein2e-25117
NC_013716:2139952:2186943218694321882531311Citrobacter rodentium ICC168, complete genomehypothetical protein2e-25117
NC_015682:205900:2467522467522481191368Thermodesulfobacterium sp. OPB45 chromosome, complete genomeRadical SAM domain-containing protein2e-24114
NC_013510:1637730:1661998166199816634311434Thermomonospora curvata DSM 43183, complete genomeRadical SAM domain protein3e-24113
NC_020418:3022891:3022891302289130242371347Morganella morganii subsp. morganii KT, complete genomeBchE/P-methylase family protein5e-24112
NC_015275:1480500:1489967148996714913161350Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein2e-23111
NC_014973:4630132:4670770467077046721941425Geobacter sp. M18 chromosome, complete genomecobalamin B12-binding domain-containing protein3e-23110
NC_011830:4234392:4244459424445942458081350Desulfitobacterium hafniense DCB-2, complete genomeRadical SAM domain protein1e-22108
NC_007907:3230513:3242134324213432435191386Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-21104
NC_011059:2272747:2295649229564922970761428Prosthecochloris aestuarii DSM 271, complete genomeRadical SAM domain protein7e-21102
NC_014963:558000:5617885617885633531566Terriglobus saanensis SP1PR4 chromosome, complete genomeRadical SAM domain-containing protein8e-21102
NC_015275:1480500:1494942149494214962671326Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein2e-20100
NC_015275:1480500:1496325149632514976561332Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein3e-20100
NC_020418:3022891:3024237302423730256311395Morganella morganii subsp. morganii KT, complete genomehypothetical protein1e-1998.6
NC_015275:1480500:1488671148867114899541284Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein1e-1791.7
NC_013716:2139952:2190621219062121919791359Citrobacter rodentium ICC168, complete genomehypothetical protein2e-1790.9
NC_003901:3207154:3212077321207732133541278Methanosarcina mazei Go1, complete genomehypothetical protein2e-1790.9
NC_013849:19404:3305733057344541398Ferroglobus placidus DSM 10642 chromosome, complete genomeRadical SAM domain protein8e-1789
NC_015275:1480500:1491270149127014926311362Clostridium lentocellum DSM 5427 chromosome, complete genomeRadical SAM domain protein5e-1686.3
NC_013716:2139952:2185603218560321869461344Citrobacter rodentium ICC168, complete genomehypothetical protein1e-1585.1
NC_016631:2112175:2158773215877321603771605Granulicella mallensis MP5ACTX8 chromosome, complete genomeradical SAM protein1e-1481.6
NC_014844:762794:7785687785687800221455Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein4e-1480.1
NC_008609:3672653:3680168368016836839203753Pelobacter propionicus DSM 2379, complete genomeglycosyl transferase, family 23e-1377
NC_013851:2211120:2221844222184422232921449Allochromatium vinosum DSM 180 chromosome, complete genomeRadical SAM domain protein1e-1275.1
NC_018645:4490957:4512926451292645144161491Desulfobacula toluolica Tol2, complete genomecobalamin-binding radical SAM protein2e-1170.9
NC_015416:1571451:1573507157350715752581752Methanosaeta concilii GP-6 chromosome, complete genomeB12 binding domain/radical SAM domain fusion protein1e-1068.6
NC_012797:1:1133711337127821446Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencehypothetical protein2e-1068.2
NC_002939:2697767:2717042271704227196362595Geobacter sulfurreducens PCA, complete genomeTPR domain/radical SAM/B12 binding domain protein2e-1067.8
NC_009033:653462:6723696723696737931425Staphylothermus marinus F1, complete genomeRadical SAM domain protein2e-1067.8
NC_008816:1416711:1444580144458014461991620Prochlorococcus marinus str. AS9601, complete genomeFe-S oxidoreductase8e-1065.9
NC_014507:1403000:1418340141834014198121473Methanoplanus petrolearius DSM 11571 chromosome, complete genomeRadical SAM domain-containing protein8e-1065.9
NC_009455:273519:2907222907222922061485Dehalococcoides sp. BAV1 chromosome, complete genomeradical SAM domain-containing protein1e-0965.1
NC_011060:459615:5010805010805029091830Pelodictyon phaeoclathratiforme BU-1, complete genomeRadical SAM domain protein2e-0964.7
NC_015416:621513:6369866369866384461461Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein2e-0964.3
NC_007356:51080:7733677336788201485Dehalococcoides sp. CBDB1, complete genomeradical SAM/B12 binding domain protein2e-0964.3
NC_009075:15017:3925639256411991944Burkholderia pseudomallei 668 chromosome II, complete sequenceFe-S oxidoreductase3e-0963.9
NC_014658:743453:7607717607717620601290Methanothermus fervidus DSM 2088 chromosome, complete genomeradical sam domain protein2e-0963.9
NC_007955:1664998:1681943168194316834061464Methanococcoides burtonii DSM 6242, complete genomeFe-S protein, radical SAM family3e-0963.5
NC_009840:1485383:1514366151436615159881623Prochlorococcus marinus str. MIT 9215, complete genomeFe-S oxidoreductase4e-0963.2
NC_020304:129321:1511821511821526781497Desulfocapsa sulfexigens DSM 10523, complete genomeFe-S oxidoreductase5e-0963.2
NC_012797:1:2434224342258471506Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencecobalamin vitamin B12-binding domain/radical SAM domain protein5e-0963.2
NC_019977:2141677:2156291215629121573971107Methanomethylovorans hollandica DSM 15978, complete genomeB12-binding domain/radical SAM domain protein, MJ_1487 family7e-0962.8
NC_010831:2078329:209216920921692093035867Chlorobium phaeobacteroides BS1, complete genomecobalamin B12-binding domain protein8e-0962.4
NC_011832:619874:6379966379966394651470Candidatus Methanosphaerula palustris E1-9c, complete genomeRadical SAM domain protein1e-0862
NC_014844:762794:7854937854937874962004Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRadical SAM domain-containing protein1e-0861.6
NC_009051:2365711:2375357237535723768291473Methanoculleus marisnigri JR1, complete genomeRadical SAM domain protein3e-0860.8
NC_008639:2968000:2968727296872729705531827Chlorobium phaeobacteroides DSM 266, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase3e-0860.5
NC_009975:1203372:1230965123096512322901326Methanococcus maripaludis C6, complete genomeRadical SAM domain protein3e-0860.5
NC_007643:889755:8955118955118969651455Rhodospirillum rubrum ATCC 11170, complete genomeFe-S oxidoreductase3e-0860.5
NC_011978:493800:4986494986494997791131Thermotoga neapolitana DSM 4359, complete genomehypothetical protein1e-0758.5
NC_008609:2787274:2792682279268227947062025Pelobacter propionicus DSM 2379, complete genomeMagnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase1e-0758.5
NC_013552:68003:9497094970964541485Dehalococcoides sp. VS, complete genomeradical SAM/B12 binding domain protein1e-0758.2
NC_015437:1685824:1693465169346516952371773Selenomonas sputigena ATCC 35185 chromosome, complete genomeRadical SAM domain protein2e-0757.8
NC_011146:3991683:3998022399802239991311110Geobacter bemidjiensis Bem, complete genomeRadical SAM domain protein2e-0757.8
NC_002932:1851070:1855813185581318574531641Chlorobium tepidum TLS, complete genomemagnesium-protoporphyrin IX monomethyl ester oxidative cyclase, 66 kDa subunit2e-0757.4
NC_007954:1324062:1343878134387813455781701Shewanella denitrificans OS217, complete genomeRadical SAM3e-0757
NC_011653:1339868:1349215134921513503451131Thermosipho africanus TCF52B, complete genomeFe-S oxidoreductase family protein5e-0756.6
NC_014623:659422:6682526682526698741623Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein6e-0756.2
NC_018664:985689:9878449878449896281785Clostridium acidurici 9a chromosome, complete genomecobalamin B12-binding/radical SAM domain-containing protein1e-0655.5
NC_011567:2405000:2414483241448324159881506Anoxybacillus flavithermus WK1, complete genomeRadical SAM superfamily enzyme1e-0655.5
NC_009464:2523092:2544684254468425461291446Uncultured methanogenic archaeon RC-I, complete genomepredicted Fe-S cluster-binding oxidoreductase1e-0655.5
NC_015562:1299648:1321696132169613228591164Methanotorris igneus Kol 5 chromosome, complete genomeRadical SAM domain-containing protein2e-0654.7
NC_019748:1846500:1847474184747418490541581Stanieria cyanosphaera PCC 7437, complete genomeRadical SAM domain protein3e-0653.9
NC_017192:1841987:1872735187273518742461512Arcobacter sp. L, complete genomehypothetical protein4e-0653.5
NC_014166:2959688:2960989296098929624491461Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeradical SAM domain-containing protein4e-0653.5