Pre_GI: BLASTP Hits

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Query: NC_017168:3192817:3202951 Yersinia pestis A1122 chromosome, complete genome

Start: 3202951, End: 3204663, Length: 1713

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:1632025:1656459165645916581711713Escherichia coli UTI89, complete genomephage hypothetical protein01010
NC_012724:359444:3740103740103756531644Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein1e-1895.1
NC_012917:2362725:2378084237808423793371254Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein4e-1686.7
NC_009074:2914053:2923970292397029257481779Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein2e-0964.7