Pre_GI: BLASTP Hits

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Query: NC_017062:547317:564534 Rickettsia typhi str. B9991CWPP chromosome, complete genome

Start: 564534, End: 565562, Length: 1029

Host Lineage: Rickettsia typhi; Rickettsia; Rickettsiaceae; Rickettsiales; Proteobacteria; Bacteria

General Information: This genus, like other Rickettsial organisms such as Neorickettsia and Anaplasma, is composed of obligate intracellular pathogens. The latter is composed of two organisms, Rickettsia prowazekii and Rickettsia typhi. The bacteria are transmitted via an insect, usually a tick, to a host organism, in this case humans, where they target endothelial cells and sometimes macrophages. They attach via an adhesin, rickettsial outer membrane protein A, and are internalized where they persist as cytoplasmically free organisms. Transovarial transmission (from mother to offspring) occurs in the invertebrate host. This organism causes murine typhus and is an obligate intracellular pathogen that infects both the flea vector and hosts such as human, rat, and mouse. R. prowazekii, and genomic comparisons demonstrate colinearity and similarity to the genome of that organism except for two independent inversions near the origin and terminus. In the flea vector, the bacterium penetrates the gut epithelial barrier and is found in the feces which become infective.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017044:702483:7277517277517287791029Rickettsia parkeri str. Portsmouth chromosome, complete genomeisopentenyl pyrophosphate isomerase7e-167586
NC_010475:1161000:1165385116538511664131029Synechococcus sp. PCC 7002, complete genomeisopentenyl-diphosphate delta-isomerase, type 28e-86317
NC_004193:375416:5704025704025714511050Oceanobacillus iheyensis HTE831, complete genomeisopentenyl pyrophosphate isomerase7e-79294
NC_015634:2492771:2518119251811925192371119Bacillus coagulans 2-6 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 27e-78291
NC_020260:312805:3140763140763151191044Cronobacter sakazakii Sp291, complete genomeisopentenyl pyrophosphate isomerase1e-77290
NC_000911:1957758:1979144197914419801931050Synechocystis sp. PCC 6803, complete genomeisopentenyl pyrophosphate isomerase6e-77287
NC_017039:1957610:1978172197817219792211050Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein6e-77287
NC_017052:1957598:1978160197816019792091050Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein6e-77287
NC_017277:1957399:1977961197796119790101050Synechocystis sp. PCC 6803, complete genomehypothetical protein6e-77287
NC_014622:5251000:5265780526578052668801101Paenibacillus polymyxa SC2 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-74278
NC_016641:1006662:1028324102832410294241101Paenibacillus terrae HPL-003 chromosome, complete genomeisopentenyl pyrophosphate isomerase1e-73276
NC_014483:4891100:4906574490657449076741101Paenibacillus polymyxa E681 chromosome, complete genomeIsopentenyl-diphosphate delta-isomerase8e-73274
NC_014471:163404:1668421668421679841143Ignisphaera aggregans DSM 17230 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 28e-62237
NC_008698:235688:2398392398392409241086Thermofilum pendens Hrk 5, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-61236
NC_003106:2060628:2068164206816420692731110Sulfolobus tokodaii str. 7, complete genomeisopentenyl pyrophosphate isomerase9e-61234
NC_015574:1541613:1553725155372515547801056Methanobacterium sp. SWAN-1 chromosome, complete genomeIsopentenyl-diphosphate delta-isomerase5e-60231
NC_013741:1304000:1325239132523913263181080Archaeoglobus profundus DSM 5631, complete genomeisopentenyl-diphosphate delta-isomerase, type 21e-58226
NC_015435:120334:1311751311751322751101Metallosphaera cuprina Ar-4 chromosome, complete genomeisopentenyl pyrophosphate isomerase1e-58226
NC_007681:979815:9918489918489928971050Methanosphaera stadtmanae DSM 3091, complete genomeisopentenyl-diphosphate delta-isomerase2e-58226
NC_008095:6253610:6276084627608462771421059Myxococcus xanthus DK 1622, complete genomeisopentenyl-diphosphate delta-isomerase, type 24e-58225
NC_002754:46297:5220752207533131107Sulfolobus solfataricus P2, complete genomeisopentenyl pyrophosphate isomerase5e-58224
NC_005877:509877:5243145243145253631050Picrophilus torridus DSM 9790, complete genomeisopentenyl pyrophosphate isomerase1e-56220
NC_015518:614806:6204316204316215281098Acidianus hospitalis W1 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-56219
NC_009376:37851:3893938939399971059Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeisopentenyl pyrophosphate isomerase2e-56219
NC_016885:2091918:2124638212463821256961059Pyrobaculum oguniense TE7 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-56219
NC_014507:758820:7736857736857747371053Methanoplanus petrolearius DSM 11571 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-56219
NC_012632:1980332:1991077199107719921831107Sulfolobus islandicus M.16.27 chromosome, complete genomeisopentenyl pyrophosphate isomerase2e-56219
NC_014160:1273859:1295904129590412970161113Thermosphaera aggregans DSM 11486 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 26e-56218
NC_012589:2006323:2017062201706220181681107Sulfolobus islandicus L.S.2.15, complete genomeisopentenyl-diphosphate delta-isomerase, type 25e-56218
NC_012588:1874242:1884981188498118860871107Sulfolobus islandicus M.14.25 chromosome, complete genomeisopentenyl pyrophosphate isomerase5e-56218
NC_012622:1944544:1955283195528319563891107Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeisopentenyl pyrophosphate isomerase5e-56218
NC_012623:663020:6693316693316704371107Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeisopentenyl pyrophosphate isomerase5e-56218
NC_012726:1878503:1889242188924218903481107Sulfolobus islandicus M.16.4 chromosome, complete genomeisopentenyl pyrophosphate isomerase5e-56218
NC_013769:1993557:2004296200429620054021107Sulfolobus islandicus L.D.8.5 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase5e-56218
NC_017275:1909403:1920143192014319212491107Sulfolobus islandicus HVE10/4 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase5e-56218
NC_017276:1772146:1782885178288517839911107Sulfolobus islandicus REY15A chromosome, complete genomeisopentenyl-diphosphate delta-isomerase5e-56218
NC_009464:2881771:2887961288796128890341074Uncultured methanogenic archaeon RC-I, complete genomeisopentenyl-diphosphate delta-isomerase2e-55216
NC_009776:707785:7119547119547130361083Ignicoccus hospitalis KIN4/I, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-55216
NC_015931:857327:8670268670268681501125Pyrolobus fumarii 1A, complete genomeisopentenyl-diphosphate delta-isomerase, type 25e-55215
NC_018876:863314:8748438748438759461104Methanolobus psychrophilus R15 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-54214
NC_014374:318528:3270113270113281441134Acidilobus saccharovorans 345-15 chromosome, complete genomeisopentenyl pyrophosphate isomerase6e-55214
NC_014205:1553530:1559340155934015604671128Staphylothermus hellenicus DSM 12710 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 23e-53209
NC_009033:791515:8167168167168178401125Staphylothermus marinus F1, complete genomeisopentenyl-diphosphate delta-isomerase, type 21e-52207
NC_019977:1621939:1627137162713716282671131Methanomethylovorans hollandica DSM 15978, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-52206
NC_009073:1:1120911209122671059Pyrobaculum calidifontis JCM 11548, complete genomeisopentenyl-diphosphate delta-isomerase, type 25e-52205
NC_009515:1409912:1463857146385714649031047Methanobrevibacter smithii ATCC 35061, complete genomeisopentenyl pyrophosphate isomerase7e-52204
NC_000909:762859:7853037853037863821080Methanocaldococcus jannaschii DSM 2661, complete genomeisopentenyl pyrophosphate isomerase1e-50200
NC_011725:1486635:1486635148663514876841050Bacillus cereus B4264 chromosome, complete genomeisopentenyl pyrophosphate isomerase2e-49196
NC_014122:665684:6680556680556691191065Methanocaldococcus infernus ME chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-49196
NC_010673:703816:7314337314337325121080Borrelia hermsii DAH, complete genomeisopentenyl-diphosphate delta-isomerase2e-49196
NC_003551:723901:7378727378727389961125Methanopyrus kandleri AV19, complete genomeisopentenyl pyrophosphate isomerase7e-49194
NC_008710:703740:7288497288497299281080Borrelia turicatae 91E135, complete genomeisopentenyl-diphosphate delta-isomerase8e-47187
NC_007181:55685:685886858869499912Sulfolobus acidocaldarius DSM 639, complete genomeisopentenyl pyrophosphate isomerase2e-44179
NC_014961:1283889:1292653129265312937711119Desulfurococcus mucosus DSM 2162 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase, type 22e-44179
NC_011766:1255503:1261218126121812623901173Desulfurococcus kamchatkensis 1221n chromosome, complete genomeisopentenyl pyrophosphate isomerase8e-43174
NC_017954:471000:4886604886604897271068Thermogladius cellulolyticus 1633 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42172
NC_014644:1363445:1375351137535113778402490Gardnerella vaginalis ATCC 14019 chromosome, complete genomeputative isopentenyl-diphosphate delta-isomerase2e-40167
NC_013192:1765981:1768489176848917694961008Leptotrichia buccalis DSM 1135, complete genomeisopentenyl-diphosphate delta-isomerase, type 28e-40164
NC_015433:285581:2932622932622943591098Streptococcus suis ST3 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase6e-39161
NC_012924:277325:2818372818372829341098Streptococcus suis SC84, complete genomeisopentenyl pyrophosphate isomerase1e-38160
NC_009443:277246:2817642817642828611098Streptococcus suis 98HAH33, complete genomeisopentenyl pyrophosphate isomerase1e-38160
NC_009442:277392:2819102819102830071098Streptococcus suis 05ZYH33 chromosome, complete genomeisopentenyl pyrophosphate isomerase1e-38160
NC_012925:275704:2822722822722833691098Streptococcus suis P1/7, complete genomeisopentenyl pyrophosphate isomerase1e-38160
NC_015573:3167207:3185769318576931869711203Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeIsopentenyl-diphosphate delta-isomerase2e-28127