Pre_GI: BLASTP Hits

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Query: NC_016944:1621575:1628467 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1628467, End: 1628973, Length: 507

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016816:2953530:295865229586522959125474Pantoea ananatis LMG 5342, complete genomephage terminase small subunit9e-0856.2
NC_002937:1578213:157991515799151580382468Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeterminase, small subunit2e-0755.1
NC_021184:4493440:449344044934404493913474Desulfotomaculum gibsoniae DSM 7213, complete genomephage terminase, small subunit, putative, P27 family5e-0753.9
NC_020418:2084937:210052121005212100991471Morganella morganii subsp. morganii KT, complete genomePhage terminase small subunit5e-0753.9
NC_014328:303063:365413365413365883471Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative phage terminasesmall subunit2e-0651.6
NC_015520:3060495:308298130829813083457477Mahella australiensis 50-1 BON chromosome, complete genomephage terminase, small subunit P27 family2e-0651.6
NC_014837:1570500:158504415850441585517474Pantoea sp. At-9b chromosome, complete genomephage terminase small subunit, , P27 family2e-0651.6
NC_014915:2963500:298966729896672990164498Geobacillus sp. Y412MC52 chromosome, complete genomephage terminase, small subunit, , P27 family3e-0651.2
NC_013411:597235:613771613771614268498Geobacillus sp. Y412MC61, complete genomephage terminase, small subunit, , P27 family3e-0651.2
NC_011769:2016000:203665820366582037131474Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeputative phage terminase, small subunit, P27 family5e-0650.4
NC_020181:5217000:522372352237235224187465Enterobacter aerogenes EA1509E, complete genomePhage terminase small subunit7e-0650.1
NC_014365:2843126:284507928450792845537459Desulfarculus baarsii DSM 2075 chromosome, complete genomephage terminase, small subunit, , P27 family9e-0649.7