Pre_GI: BLASTP Hits

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Query: NC_016848:12548:18409 Treponema pallidum subsp. pertenue str. CDC2 chromosome, complete

Start: 18409, End: 19356, Length: 948

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Akorabo, Ghana in 1980. Treponema pallidum subsp. pertenue causes chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021508:12543:184041840419351948Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein9e-174609
NC_000919:12545:184041840419351948Treponema pallidum subsp. pallidum str. Nichols, complete genomehypothetical protein9e-174609
NC_010741:12542:184011840119348948Treponema pallidum subsp. pallidum SS14, complete genomehypothetical protein9e-174609
NC_016842:1:184091840919356948Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeTPR domain-containing protein9e-174609
NC_016843:1:184091840919356948Treponema pallidum subsp. pertenue str. Gauthier chromosome,TPR domain-containing protein9e-174609
NC_016844:12545:184061840619353948Treponema pallidum subsp. pallidum DAL-1 chromosome, completehypothetical protein9e-174609
NC_017268:1:184071840719354948Treponema pallidum subsp. pallidum str. Chicago chromosome,TPR domain-containing protein9e-174609
NC_014484:1163576:119778111977811198716936Spirochaeta thermophila DSM 6192 chromosome, complete genomeTPR domain-containing protein4e-55215
NC_010673:113133:130843130843131787945Borrelia hermsii DAH, complete genomehypothetical protein6e-45181
NC_019908:1296870:131021413102141311194981Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein1e-1274.3
NC_014330:1957725:195772519577251958705981Brachyspira pilosicoli 95/1000 chromosome, complete genomeTPR domain-containing protein1e-1274.3