Pre_GI: BLASTP Hits

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Query: NC_016845:5162481:5181494 Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,

Start: 5181494, End: 5181769, Length: 276

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3590323:379242237924223792697276Shigella flexneri 2a str. 301, complete genomeDNA-directed RNA polymerase omega subunit7e-34142
NC_012731:5074000:509301950930195093294276Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeDNA-directed RNA polymerase subunit omega3e-33140
NC_011283:105245:105245105245105520276Klebsiella pneumoniae 342 chromosome, complete genomeDNA-directed RNA polymerase subunit omega3e-33140
NC_011094:3778000:381893838189383819213276Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-directed RNA polymerase subunit omega3e-33140
NC_009648:4359875:437883943788394379114276Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-directed RNA polymerase subunit omega3e-33140
NC_009778:4014026:403162540316254031900276Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-33140
NC_020260:4029951:404756340475634047838276Cronobacter sakazakii Sp291, complete genomeDNA-directed RNA polymerase subunit omega3e-33140
NC_010694:63654:657976579766072276Erwinia tasmaniensis, complete genomeDNA-directed RNA polymerase omega chain5e-33139
NC_013961:73037:751807518075455276Erwinia amylovora, complete genomeDNA-directed RNA polymerase omega chain5e-33139
NC_013971:73037:751807518075455276Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA-directed RNA polymerase subunit omega5e-33139
NC_013716:4306695:439799943979994398274276Citrobacter rodentium ICC168, complete genomeDNA-directed RNA polymerase omega chain9e-33138
NC_013508:26348:324733247332748276Edwardsiella tarda EIB202, complete genomeDNA-directed RNA polymerase, subunit omega2e-32137
NC_016816:127802:129931129931130206276Pantoea ananatis LMG 5342, complete genomeDNA-directed RNA polymerase subunit omega3e-31133
NC_013956:4326388:434453943445394344814276Pantoea ananatis LMG 20103 chromosome, complete genomeRpoZ3e-31133
NC_020064:4751097:477141747714174771692276Serratia marcescens FGI94, complete genomeDNA-directed RNA polymerase, omega subunit1e-30131
NC_008800:36500:577415774158016276Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-directed RNA polymerase subunit omega6e-30129
NC_009832:5369566:539112653911265391401276Serratia proteamaculans 568, complete genomeDNA-directed RNA polymerase, omega subunit2e-29127
NC_005126:274000:290628290628290918291Photorhabdus luminescens subsp. laumondii TTO1, complete genomeDNA-directed RNA polymerase omega subunit8e-29125
NC_008309:1628939:165109316510931651365273Haemophilus somnus 129PT, complete genomeDNA-directed RNA polymerase, omega chain7e-23105
NC_014366:354000:373619373619373861243Gamma proteobacterium HdN1, complete genomeDNA-directed RNA polymerase omega chain5e-1786.3
NC_014532:3967463:398471239847123984990279Halomonas elongata DSM 2581, complete genomeDNA-directed RNA polymerase subunit omega1e-1581.6
NC_007912:4661141:468121346812134681485273Saccharophagus degradans 2-40, complete genomeDNA-directed RNA polymerase, omega subunit2e-1580.9
NC_014752:617987:620224620224620430207Neisseria lactamica ST-640, complete genomeDNA-directed RNA polymerase omega chain5e-1166.2
NC_015722:4539:507750775448372Candidatus Midichloria mitochondrii IricVA chromosome, completeDNA-directed RNA polymerase subunit omega2e-0961.2
NC_007498:1491223:150726115072611507467207Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, omega subunit2e-0858.2
NC_009483:3727490:373295637329563733165210Geobacter uraniireducens Rf4 chromosome, complete genomeDNA-directed RNA polymerase subunit omega2e-0857.8
NC_009138:2110500:213021721302172130420204Herminiimonas arsenicoxydans, complete genomeDNA-directed RNA polymerase omega chain (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit)2e-0857.8
NC_015381:992401:101896410189641019167204Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA-directed RNA polymerase subunit omega2e-0857.8
NC_011979:2352961:237947523794752379684210Geobacter sp. FRC-32, complete genomeDNA-directed RNA polymerase, omega subunit4e-0857
NC_007880:1456705:146332214633221463540219Francisella tularensis subsp. holarctica, complete genomeDNA-directed RNA polymerase omega subunit1e-0755.5
NC_007517:2632233:263444326344432634652210Geobacter metallireducens GS-15, complete genomeRNA polymerase, omega subunit2e-0754.3
NC_016937:707279:721959721959722177219Francisella tularensis subsp. tularensis TI0902 chromosome,DNA-directed RNA polymerase subunit omega3e-0754.3
NC_016933:783938:797866797866798084219Francisella tularensis TIGB03 chromosome, complete genomeDNA-directed RNA polymerase subunit omega3e-0754.3
NC_008601:631504:645826645826646044219Francisella tularensis subsp. novicida U112, complete genomeDNA-directed RNA polymerase, subunit K/omega3e-0754.3
NC_006570:707280:721960721960722178219Francisella tularensis subsp. tularensis Schu 4, complete genomeDNA-directed RNA polymerase omega subunit3e-0754.3
NC_008245:707984:721912721912722130219Francisella tularensis subsp. tularensis FSC 198, complete genomeDNA-directed RNA polymerase omega subunit3e-0754.3
NC_015696:1749863:175984117598411760059219Francisella sp. TX077308 chromosome, complete genomeDNA-directed RNA polymerase subunit omega6e-0752.8
NC_010336:213148:240634240634240852219Francisella philomiragia subsp. philomiragia ATCC 25017, completeDNA-directed RNA polymerase, subunit K/omega7e-0752.8