Pre_GI: BLASTP Hits

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Query: NC_016842:1:10399 Treponema pallidum subsp. pertenue str. SamoaD chromosome, complete

Start: 10399, End: 12381, Length: 1983

Host Lineage: Treponema pallidum; Treponema; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: This strain was isolated in Western Samoa in 1953. Treponema pallidum subsp. pertenue causes the chronic and disfiguring illness called yaws. The disease starts as a skin infection causing persistent ulcers and progresses to form tumor-like masses. This disease tends to infect children and is common in rural areas in Africa, Southeast Asia and equatorial South America.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017268:1:1039710397123791983Treponema pallidum subsp. pallidum str. Chicago chromosome,tpr protein B01290
NC_016843:1:1039910399123811983Treponema pallidum subsp. pertenue str. Gauthier chromosome,Tpr protein B01290
NC_015714:1:1044310443124251983Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeTpr protein B01283
NC_015714:1:83428342101681827Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeTpr protein A3e-33144
NC_016843:1:83448344101671824Treponema pallidum subsp. pertenue str. Gauthier chromosome,Tpr protein A2e-29131
NC_016842:1:83448344101671824Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeTpr protein A3e-29130
NC_017268:1:8341834193901050Treponema pallidum subsp. pallidum str. Chicago chromosome,tpr protein A (tprA)8e-25115
NC_017268:1:937493749826453Treponema pallidum subsp. pallidum str. Chicago chromosome,tpr protein A (tprA)7e-1686.3