Pre_GI: BLASTP Hits

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Query: NC_016830:530397:559571 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 559571, End: 560515, Length: 945

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012225:316000:323282323282324244963Brachyspira hyodysenteriae WA1, complete genomeglycosyl transferase, family 2; lipid A biosynthesis acyltransferase family8e-32137
NC_006677:1503513:152399015239901524901912Gluconobacter oxydans 621H, complete genomeAcyltransferase5e-28125
NC_009614:1328050:134936613493661350250885Bacteroides vulgatus ATCC 8482 chromosome, complete genomeacyltransferase1e-23110
NC_018645:4490957:450716145071614508051891Desulfobacula toluolica Tol2, complete genomelipid A biosynthesis acyltransferase4e-1479
NC_014166:2319447:231944723194472320307861Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeacyltransferase5e-1065.5
NC_007498:3085511:310602531060253106936912Pelobacter carbinolicus DSM 2380, complete genomepredicted acyltransferase2e-0756.6
NC_016629:3308329:332945833294583330372915Desulfovibrio africanus str. Walvis Bay chromosome, completelipid A biosynthesis acyltransferase5e-0652