Pre_GI: BLASTP Hits

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Query: NC_016830:4914406:4925727 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4925727, End: 4926359, Length: 633

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:501390750139075014539633Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-105380
NC_009255:1890112:189374818937481894386639Burkholderia vietnamiensis G4 chromosome 2, complete sequencelysine exporter protein LysE/YggA6e-33140
NC_006582:1297039:129924912992491299878630Bacillus clausii KSM-K16, complete genomethreonine efflux protein3e-0961.6
NC_016023:1959255:196428419642841964928645Bacillus coagulans 36D1 chromosome, complete genomelysine exporter protein LysE/YggA6e-0960.8
NC_003454:339345:351775351775352398624Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeL-lysine permease7e-0753.9
NC_013456:1819421:182398218239821824617636Vibrio sp. Ex25 chromosome 1, complete genomethreonine efflux protein9e-0650.1