Pre_GI: BLASTP Hits

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Query: NC_016830:4914406:4914406 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4914406, End: 4915722, Length: 1317

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:5002595:5002595500259550038751281Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative exported protein0705
NC_016613:2759908:2779131277913127804051275Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein1e-44181
NC_010334:2749250:2762037276203727633771341Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein2e-37157
NC_009901:2427291:2440901244090124422381338Shewanella pealeana ATCC 700345, complete genomeconserved hypothetical protein1e-36154
NC_016002:2453919:2490772249077224920581287Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein1e-1377.8
NC_007614:2675302:2684550268455026858631314Nitrosospira multiformis ATCC 25196 chromosome 1, completehypothetical protein8e-0962
NC_013223:1349000:136871013687101369681972Desulfohalobium retbaense DSM 5692, complete genomeProtein of unknown function DUF2134, membrane9e-0962