Pre_GI: BLASTP Hits

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Query: NC_016830:4010637:4017444 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4017444, End: 4018088, Length: 645

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005125:839000:855551855551856189639Gloeobacter violaceus PCC 7421, complete genomeTetR family transcriptional regulatory protein4e-1374.7
NC_010162:7824878:782765278276527828311660Sorangium cellulosum 'So ce 56', complete genomeHTH-type transcriptional regulator betI2e-1169.3
NC_009832:1664238:166517116651711665797627Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family1e-0860.1
NC_015563:5162177:517872451787245179383660Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR3e-0858.9
NC_011666:1923776:192555519255551926166612Methylocella silvestris BL2, complete genometranscriptional regulator, TetR family4e-0858.2
NC_010611:208268:215511215511216098588Acinetobacter baumannii ACICU, complete genomeTranscriptional regulator5e-0857.8
NC_014311:263963:302984302984303634651Ralstonia solanacearum PSI07 chromosome, complete genomeTetR family transcriptional regulator7e-0857.4
NC_003295:856775:862903862903863580678Ralstonia solanacearum GMI1000, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN7e-0857.4
NC_016147:3349272:335056133505613351142582Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator1e-0756.2
NC_010410:3719599:373387537338753734471597Acinetobacter baumannii AYE, complete genomeputative transcription regulator protein (TetR family)1e-0756.2
NC_018691:3082000:308815230881523088802651Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, TetR family2e-0755.5
NC_006177:2398482:242190624219062422553648Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator2e-0755.5
NC_017161:1117741:112188511218851122460576Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_013799:1117750:112189411218941122469576Hydrogenobacter thermophilus TK-6, complete genometranscriptional regulator, TetR family3e-0755.1
NC_016935:4813916:481510148151014815688588Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator3e-0755.1
NC_016048:1438721:146311314631131463769657Oscillibacter valericigenes Sjm18-20, complete genomeputative TetR family transcriptional regulator2e-0652.4
NC_016114:7282882:731226473122647312881618Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR4e-0651.2
NC_018691:1322389:132622213262221326935714Alcanivorax dieselolei B5 chromosome, complete genometranscriptional regulator, TetR family protein6e-0650.8