Pre_GI: BLASTP Hits

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Query: NC_016830:2642881:2660165 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 2660165, End: 2661082, Length: 918

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:4249238:425521242552124256129918Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-132471
NC_014221:591785:614960614960615919960Truepera radiovictrix DSM 17093 chromosome, complete genomeprotein of unknown function DUF6 transmembrane9e-31134
NC_019842:3921424:393535939353593936270912Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,permease7e-29127
NC_020272:20435:284262842629337912Bacillus amyloliquefaciens IT-45, complete genomepermease1e-28127
NC_016047:683368:699679699679700581903Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeeama family transporter1e-28127
NC_020410:3868573:388088938808893881800912Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative permease2e-27123
NC_017191:3901914:391095039109503911831882Bacillus amyloliquefaciens XH7 chromosome, complete genomepermease2e-26119
NC_017188:3900951:390925839092583910139882Bacillus amyloliquefaciens TA208 chromosome, complete genomeputative permease2e-26119
NC_008711:424482:429761429761430702942Arthrobacter aurescens TC1, complete genomeputative Integral membrane protein DUF63e-0962.8